Factsheet for TraesCS2A01G176700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G203200.1	Wheat	mitochondrion	30.97	71.16
TraesCS2D01G184200.1	Wheat	mitochondrion	30.29	68.31
Os07t0602600-01	Rice	mitochondrion	16.23	50.0
TraesCS4A01G293000.1	Wheat	plastid	11.05	50.0
GSMUA_Achr4P03230_001	Banana	mitochondrion	16.78	48.05
GSMUA_Achr9P07090_001	Banana	mitochondrion	15.42	47.48
TraesCS5A01G015000.1	Wheat	nucleus	10.5	45.29
TraesCS3A01G428400.1	Wheat	mitochondrion	13.78	44.69
KXG36643	Sorghum	mitochondrion	19.24	44.62
TraesCS3A01G422600.1	Wheat	nucleus	10.5	44.51
Zm00001d022065_P001	Maize	mitochondrion	18.69	44.48
VIT_17s0000g07330.t01	Wine grape	plastid	16.64	44.04
TraesCS6A01G216500.1	Wheat	nucleus	9.69	43.83
Solyc02g066930.2.1	Tomato	nucleus	12.55	42.59
TraesCS5A01G460900.1	Wheat	mitochondrion	17.6	42.3
CDY16825	Canola	plastid	15.01	41.83
KRH03133	Soybean	nucleus	15.55	41.45
Bra035944.1-P	Field mustard	plastid	14.73	41.06
KRH01278	Soybean	mitochondrion, nucleus, plastid	13.64	40.98
Bra012986.1-P	Field mustard	mitochondrion	16.51	39.67
KRH56813	Soybean	mitochondrion	14.73	39.42
PGSC0003DMT400064758	Potato	mitochondrion	13.37	39.04
TraesCS4A01G100000.1	Wheat	mitochondrion	5.46	38.46
KRH45033	Soybean	nucleus, plastid	12.82	38.37
AT5G61030.1	Thale cress	mitochondrion	15.96	37.86
TraesCS2A01G296100.1	Wheat	mitochondrion	6.82	35.97
CDY02175	Canola	mitochondrion	16.23	35.1
TraesCS3A01G534200.1	Wheat	mitochondrion	5.18	34.86
TraesCS2A01G212000.1	Wheat	mitochondrion	6.55	34.29
TraesCS1A01G405700.1	Wheat	mitochondrion	5.18	34.23
PGSC0003DMT400003685	Potato	nucleus	13.92	33.66
CDX87197	Canola	plastid	15.01	33.43
TraesCS7A01G307200.1	Wheat	plastid	6.68	32.03
TraesCS3A01G418900.1	Wheat	mitochondrion	6.0	30.14
Solyc02g088790.2.1	Tomato	extracellular, plastid	15.28	30.03
TraesCS4A01G355700.1	Wheat	nucleus	8.59	29.86
TraesCS4A01G099700.1	Wheat	plastid	6.68	28.49
TraesCS7A01G326800.1	Wheat	nucleus	9.0	27.85
TraesCS2A01G237400.1	Wheat	nucleus	8.59	21.5
TraesCS4A01G288500.1	Wheat	nucleus	9.0	20.82
KRH54698	Soybean	plastid	16.23	17.66
TraesCS6A01G292000.1	Wheat	plastid	5.87	11.08

Protein Annotations

EnsemblPlants:TraesCS2A01G176700.1	EnsemblPlantsGene:TraesCS2A01G176700	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf	InterPro:RRM_dom	ncoils:Coil
PANTHER:PTHR45502	PFAM:PF00076	PFscan:PS50102	SEG:seg	SMART:SM00360	SUPFAM:SSF54928
TMHMM:TMhelix	MapMan:16.12.5.2	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:136121647..136124916

Molecular Weight (calculated)

35095.8 Da

IEP (calculated)

8.258

GRAVY (calculated)

0.026

Length

733 amino acids

Sequence
(BLAST)

001: MAFASRMGIV LRRASGSSNS SLLQAVRCMS SSKLFVGGLS YATDDPTLRD AFSGYGDVIE ARIIMDRESG RSKGFGFVTY ASTEAAAAAI SAMDGKDLHG
101: RMIKVGYASD RAGGTRGGGY GTGNYGSGGY GGAGYGSGGG GYAGNGGGYR SGGYVSTGYG SGGGGYVGNG ADYGSAGHAS GGGYGNAGYG GYSGAAGGGE
201: YSSMNNNAVA GGYGGGDGSY NNASNSGGSG GSYGSGGGIY NNASNSGGSS GGYGGGGGSY NNASNSXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXKALAVSA AGILLLLVAT TASTALVGTI LPTPMVPATT TVELAAMQPL AKALAVSAAG ILLLLVATTA
701: STALVGTILP TPMAPATTTV ELVATTAATL LEM

Best Arabidopsis Sequence Match ( AT5G61030.1 )
(BLAST)

001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA

Arabidopsis Description

RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.