Factsheet for TraesCS2B01G203200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G184200.1	Wheat	mitochondrion	90.6	88.92
TraesCS4B01G020300.1	Wheat	extracellular	25.71	50.31
KXG36643	Sorghum	mitochondrion	48.9	49.37
GSMUA_Achr9P07090_001	Banana	mitochondrion	36.68	49.16
Os07t0602600-01	Rice	mitochondrion	36.36	48.74
Zm00001d022065_P001	Maize	mitochondrion	46.4	48.05
GSMUA_Achr4P03230_001	Banana	mitochondrion	38.24	47.66
TraesCS5B01G013200.1	Wheat	nucleus	24.76	47.31
VIT_17s0000g07330.t01	Wine grape	plastid	40.75	46.93
TraesCS6B01G246400.1	Wheat	nucleus	23.82	46.91
TraesCS3B01G457900.1	Wheat	plastid	25.71	46.86
TraesCS3B01G465800.1	Wheat	mitochondrion	33.86	46.75
CDY16825	Canola	plastid	36.36	44.11
Solyc02g066930.2.1	Tomato	nucleus	29.78	43.98
Bra035944.1-P	Field mustard	plastid	35.74	43.35
TraesCS5B01G470700.1	Wheat	mitochondrion	41.38	43.0
KRH03133	Soybean	nucleus	36.36	42.18
KRH01278	Soybean	mitochondrion, nucleus, plastid	31.66	41.39
Bra012986.1-P	Field mustard	mitochondrion	39.5	41.31
PGSC0003DMT400064758	Potato	mitochondrion	32.29	41.04
KRH56813	Soybean	mitochondrion	34.8	40.51
KRH45033	Soybean	nucleus, plastid	30.41	39.59
TraesCS4B01G204300.1	Wheat	mitochondrion	12.85	38.68
AT5G61030.1	Thale cress	mitochondrion	37.3	38.51
TraesCS2B01G312500.1	Wheat	mitochondrion	15.99	36.69
CDY02175	Canola	mitochondrion	38.56	36.28
PGSC0003DMT400003685	Potato	nucleus	33.86	35.64
CDX87197	Canola	plastid	36.36	35.26
TraesCS2B01G237100.1	Wheat	mitochondrion	14.73	33.81
TraesCS3B01G610900.1	Wheat	mitochondrion	11.29	33.03
TraesCS7B01G207500.1	Wheat	mitochondrion	15.36	32.24
Solyc02g088790.2.1	Tomato	extracellular, plastid	37.62	32.17
TraesCS4B01G204600.1	Wheat	plastid	16.61	30.99
TraesCS2A01G176700.1	Wheat	mitochondrion	71.16	30.97
TraesCS3B01G454200.1	Wheat	mitochondrion	13.79	30.14
TraesCS7B01G227500.2	Wheat	nucleus	20.69	28.7
TraesCS5B01G516400.1	Wheat	nucleus	19.12	27.85
TraesCS2B01G259400.1	Wheat	nucleus	21.63	23.55
TraesCS4B01G026400.1	Wheat	nucleus	21.63	21.63
KRH54698	Soybean	plastid	38.87	18.4
TraesCS6B01G322400.1	Wheat	plastid	14.11	11.6

Protein Annotations

EnsemblPlants:TraesCS2B01G203200.1	EnsemblPlantsGene:TraesCS2B01G203200	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf	InterPro:RRM_dom	PANTHER:PTHR45502
PFAM:PF00076	PFscan:PS50102	PRINTS:PR01228	SEG:seg	SMART:SM00360	SUPFAM:SSF54928
MapMan:16.12.5.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:182931654..182935254

Molecular Weight (calculated)

30864.5 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.383

Length

319 amino acids

Sequence
(BLAST)

001: MAFASRMGIV LRRASGSSNS SLLQAVRCMS SSKLFVGGLS YATDDPTLRD AFSGYGDVLE ARIIMDRESG RSKGFGFVTY ASTEAAAAAI SAMDGKDLHG
101: RMIKVDYASD RAGGTRGGGY GTGNYGSGGY GGAGFGSGGS GYAGNGGGYG SGGHASGGGY GNAGYGGYSS AAGGGEYSSI NNNAVAGGHG GGDGSHNNAS
201: TSGGSAGSYG GAGGYNAPNT FGAGNYNSGA GDNAVLGGST GSFSSGHSAV AGGNNGGNFA GNVGSIGNFT GSRNGSSYAG EFGGAEVLGA SKVQYNGQDD
301: LLGADYFSES EDRHAGRSA

Best Arabidopsis Sequence Match ( AT5G61030.1 )
(BLAST)

001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA

Arabidopsis Description

RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.