Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035944.1-P | Field mustard | plastid | 66.67 | 78.33 |
| CDY16825 | Canola | plastid | 65.7 | 77.19 |
| Bra012986.1-P | Field mustard | mitochondrion | 75.08 | 76.07 |
| CDY02175 | Canola | mitochondrion | 74.43 | 67.85 |
| CDX87197 | Canola | plastid | 67.31 | 63.22 |
| VIT_17s0000g07330.t01 | Wine grape | plastid | 50.16 | 55.96 |
| GSMUA_Achr9P07090_001 | Banana | mitochondrion | 42.72 | 55.46 |
| AT4G13850.1 | Thale cress | mitochondrion | 27.83 | 54.43 |
| EES16016 | Sorghum | mitochondrion | 43.04 | 53.2 |
| Os12t0502200-01 | Rice | mitochondrion | 44.34 | 53.1 |
| GSMUA_Achr4P03230_001 | Banana | mitochondrion | 43.69 | 52.73 |
| AT1G74230.1 | Thale cress | mitochondrion, plastid | 48.22 | 51.56 |
| TraesCS3A01G428400.1 | Wheat | mitochondrion | 36.89 | 50.44 |
| TraesCS3D01G424100.1 | Wheat | mitochondrion | 35.6 | 50.23 |
| TraesCS3B01G465800.1 | Wheat | mitochondrion | 36.89 | 49.35 |
| KRH03133 | Soybean | nucleus | 43.69 | 49.09 |
| Zm00001d041750_P001 | Maize | mitochondrion | 41.42 | 49.04 |
| KRH56813 | Soybean | mitochondrion | 43.37 | 48.91 |
| AT3G23830.1 | Thale cress | mitochondrion, plastid | 21.36 | 48.53 |
| AT1G18630.1 | Thale cress | mitochondrion | 24.27 | 48.39 |
| AT4G39260.1 | Thale cress | nucleus | 26.21 | 47.93 |
| AT2G21660.1 | Thale cress | nucleus | 26.54 | 46.59 |
| Zm00001d023734_P003 | Maize | nucleus, plastid | 42.72 | 45.99 |
| Solyc02g066930.2.1 | Tomato | nucleus | 30.1 | 43.06 |
| PGSC0003DMT400064758 | Potato | mitochondrion | 34.95 | 43.03 |
| Os07t0602600-01 | Rice | mitochondrion | 32.69 | 42.44 |
| HORVU3Hr1G094330.2 | Barley | mitochondrion | 41.1 | 41.5 |
| AT4G13860.1 | Thale cress | cytosol | 11.65 | 41.38 |
| HORVU5Hr1G110370.1 | Barley | mitochondrion | 39.16 | 41.3 |
| TraesCS5A01G460900.1 | Wheat | mitochondrion | 40.13 | 40.66 |
| TraesCS5B01G470700.1 | Wheat | mitochondrion | 40.13 | 40.39 |
| TraesCS5D01G473100.1 | Wheat | mitochondrion | 39.81 | 40.2 |
| Zm00001d022065_P001 | Maize | mitochondrion | 38.51 | 38.64 |
| KXG36643 | Sorghum | mitochondrion | 39.48 | 38.61 |
| Os10t0321700-01 | Rice | mitochondrion | 39.48 | 38.49 |
| TraesCS2D01G184200.1 | Wheat | mitochondrion | 39.81 | 37.85 |
| TraesCS2B01G203200.1 | Wheat | mitochondrion | 38.51 | 37.3 |
| PGSC0003DMT400003685 | Potato | nucleus | 36.25 | 36.96 |
| Solyc02g088790.2.1 | Tomato | extracellular, plastid | 42.07 | 34.85 |
| AT3G08000.1 | Thale cress | plastid | 14.89 | 32.17 |
| AT2G27330.1 | Thale cress | mitochondrion | 11.97 | 31.9 |
| AT3G46020.1 | Thale cress | mitochondrion | 10.36 | 31.37 |
| AT5G06210.1 | Thale cress | mitochondrion | 14.56 | 30.82 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 11.0 | 30.09 |
| AT3G26420.1 | Thale cress | nucleus | 20.39 | 25.71 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 12.62 | 25.0 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 12.95 | 23.95 |
| KRH54698 | Soybean | plastid | 45.63 | 20.92 |
| AT5G59860.1 | Thale cress | nucleus | 10.03 | 19.75 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 19.09 | 19.03 |
| AT1G60650.2 | Thale cress | nucleus | 17.8 | 18.84 |
| AT1G73530.1 | Thale cress | plastid | 9.71 | 16.57 |
| TraesCS2A01G176700.1 | Wheat | mitochondrion | 37.86 | 15.96 |
| AT3G20930.2 | Thale cress | plastid | 10.36 | 8.44 |
Protein Annotations
| MapMan:16.12.5.2 | Gene3D:3.30.70.330 | EntrezGene:836224 | UniProt:A0A178UBT5 | EMBL:AB493804 | ProteinID:AED97414.1 |
| ProteinID:ANM69243.1 | ArrayExpress:AT5G61030 | EnsemblPlantsGene:AT5G61030 | RefSeq:AT5G61030 | TAIR:AT5G61030 | RefSeq:AT5G61030-TAIR-G |
| EnsemblPlants:AT5G61030.1 | TAIR:AT5G61030.1 | EMBL:AY060565 | EMBL:AY125548 | ProteinID:BAB10366.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003697 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016554 | GO:GO:0080156 |
| Symbol:GR-RBP3 | InterPro:IPR000504 | InterPro:IPR012677 | RefSeq:NP_001330940.1 | RefSeq:NP_200911.1 | InterPro:Nucleotide-bd_a/b_plait_sf |
| ProteinID:OAO90572.1 | PFAM:PF00076 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007098 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50102 | PANTHER:PTHR44212 | PANTHER:PTHR44212:SF3 | UniProt:Q9FNR1 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000009FE10 | SEG:seg |
Description
RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
Coordinates
chr5:+:24560309..24562527
Molecular Weight (calculated)
29986.6 Da
IEP (calculated)
4.629
GRAVY (calculated)
-0.465
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.