Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- mitochondrion 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025674.1-P | Field mustard | mitochondrion | 75.48 | 80.69 |
| CDY26743 | Canola | mitochondrion | 76.13 | 79.73 |
| CDY19230 | Canola | mitochondrion | 69.03 | 76.98 |
| AT3G23830.1 | Thale cress | mitochondrion, plastid | 38.06 | 43.38 |
| AT4G13860.1 | Thale cress | cytosol | 23.23 | 41.38 |
| AT4G13850.1 | Thale cress | mitochondrion | 41.94 | 41.14 |
| AT4G39260.1 | Thale cress | nucleus | 41.94 | 38.46 |
| AT2G21660.1 | Thale cress | nucleus | 38.71 | 34.09 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 21.94 | 30.09 |
| AT3G46020.1 | Thale cress | mitochondrion | 19.35 | 29.41 |
| Solyc10g081180.1.1 | Tomato | nucleus | 41.29 | 29.09 |
| PGSC0003DMT400072235 | Potato | mitochondrion, nucleus | 47.1 | 27.76 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 29.68 | 27.54 |
| AT5G06210.1 | Thale cress | mitochondrion | 24.52 | 26.03 |
| AT1G74230.1 | Thale cress | mitochondrion, plastid | 48.39 | 25.95 |
| AT3G08000.1 | Thale cress | plastid | 23.87 | 25.87 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 25.81 | 25.64 |
| AT5G61030.1 | Thale cress | mitochondrion | 48.39 | 24.27 |
| AT2G27330.1 | Thale cress | mitochondrion | 18.06 | 24.14 |
| AT3G26420.1 | Thale cress | nucleus | 34.84 | 22.04 |
| AT1G73530.1 | Thale cress | plastid | 20.0 | 17.13 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 32.9 | 16.45 |
| AT5G59860.1 | Thale cress | nucleus | 16.13 | 15.92 |
| AT1G60650.2 | Thale cress | nucleus | 26.45 | 14.04 |
| AT3G20930.2 | Thale cress | plastid | 19.35 | 7.92 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:838444 | UniProt:A0A178WQQ6 | ProteinID:AAF98412.1 | ProteinID:AEE29737.1 |
| EMBL:AK227482 | ArrayExpress:AT1G18630 | EnsemblPlantsGene:AT1G18630 | RefSeq:AT1G18630 | TAIR:AT1G18630 | RefSeq:AT1G18630-TAIR-G |
| EnsemblPlants:AT1G18630.1 | TAIR:AT1G18630.1 | EMBL:AY085358 | EMBL:BT005999 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009651 | Symbol:GR-RBP6 | InterPro:IPR000504 | InterPro:IPR012677 | RefSeq:NP_173298.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | ProteinID:OAP19502.1 | PFAM:PF00076 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50102 | PANTHER:PTHR45040 | UniProt:Q9FZ84 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0000060DF1 | SEG:seg |
Description
RBG6GR-RBP6 [Source:UniProtKB/TrEMBL;Acc:A0A178WQQ6]
Coordinates
chr1:+:6414609..6416459
Molecular Weight (calculated)
15961.0 Da
IEP (calculated)
10.282
GRAVY (calculated)
-0.122
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYMGLFSRA GNIFRQPRAL QASNAMLQGN LSLTPSKIFV GGLSPSTDVE LLKEAFGSFG KIVDAVVVLD RESGLSRGFG FVTYDSIEVA NNAMQAMQNK
101: ELDGRIIGVH PADSGGGGGG GGFARRGGYG GGRGGYARGG FGRGGFGGGG YGFVR
101: ELDGRIIGVH PADSGGGGGG GGFARRGGYG GGRGGYARGG FGRGGFGGGG YGFVR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.