Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09244 | Canola | mitochondrion | 72.55 | 71.15 |
| Bra020279.1-P | Field mustard | mitochondrion | 74.51 | 69.09 |
| Os01t0502800-01 | Rice | mitochondrion | 31.37 | 60.38 |
| KRH23034 | Soybean | mitochondrion | 46.08 | 54.65 |
| KRH10291 | Soybean | nucleus | 37.25 | 51.35 |
| VIT_06s0004g04260.t01 | Wine grape | mitochondrion | 50.0 | 48.11 |
| GSMUA_Achr6P34250_001 | Banana | mitochondrion | 48.04 | 44.55 |
| TraesCS4A01G100000.1 | Wheat | mitochondrion | 45.1 | 44.23 |
| TraesCS4D01G205200.1 | Wheat | mitochondrion | 45.1 | 44.23 |
| TraesCS4B01G204300.1 | Wheat | mitochondrion | 45.1 | 43.4 |
| KXG36665 | Sorghum | mitochondrion | 43.14 | 41.9 |
| AT5G59860.1 | Thale cress | nucleus | 62.75 | 40.76 |
| AT4G13860.1 | Thale cress | cytosol | 27.45 | 32.18 |
| AT2G27330.1 | Thale cress | mitochondrion | 33.33 | 29.31 |
| AT3G23830.1 | Thale cress | mitochondrion, plastid | 38.24 | 28.68 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 31.37 | 28.32 |
| AT5G06210.1 | Thale cress | mitochondrion | 37.25 | 26.03 |
| AT4G13850.1 | Thale cress | mitochondrion | 34.31 | 22.15 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 32.35 | 21.15 |
| AT3G08000.1 | Thale cress | plastid | 29.41 | 20.98 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 34.31 | 20.96 |
| AT1G73530.1 | Thale cress | plastid | 35.29 | 19.89 |
| AT1G18630.1 | Thale cress | mitochondrion | 29.41 | 19.35 |
| AT4G39260.1 | Thale cress | nucleus | 30.39 | 18.34 |
| AT2G21660.1 | Thale cress | nucleus | 28.43 | 16.48 |
| AT3G26420.1 | Thale cress | nucleus | 27.45 | 11.43 |
| AT1G74230.1 | Thale cress | mitochondrion, plastid | 32.35 | 11.42 |
| AT5G61030.1 | Thale cress | mitochondrion | 31.37 | 10.36 |
| AT1G60650.2 | Thale cress | nucleus | 26.47 | 9.25 |
| AT3G20930.2 | Thale cress | plastid | 34.31 | 9.23 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 27.45 | 9.03 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.2 | EntrezGene:823745 | ProteinID:AEE78102.1 | ArrayExpress:AT3G46020 | EnsemblPlantsGene:AT3G46020 |
| RefSeq:AT3G46020 | TAIR:AT3G46020 | RefSeq:AT3G46020-TAIR-G | EnsemblPlants:AT3G46020.1 | TAIR:AT3G46020.1 | Unigene:At.35968 |
| EMBL:BT012586 | EMBL:BT015095 | ProteinID:CAB88326.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | InterPro:IPR000504 | InterPro:IPR012677 | RefSeq:NP_190188.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50102 | PANTHER:PTHR45502 | UniProt:Q9LZT1 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000009E7FC | : |
Description
At3g46020 [Source:UniProtKB/TrEMBL;Acc:Q9LZT1]
Coordinates
chr3:-:16912285..16913350
Molecular Weight (calculated)
11423.6 Da
IEP (calculated)
10.147
GRAVY (calculated)
-0.506
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRISAQLF VSRLSAYTTD QSLRQLFSPF GQIKEARLIR DSETQRPKGF GFITFDSEDD ARKALKSLDG KIVDGRLIFV EVAKNAEEVR AGINSNKAED
101: RG
101: RG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.