Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53035 | Canola | mitochondrion | 78.48 | 82.12 |
| CDY47314 | Canola | mitochondrion | 77.85 | 82.0 |
| CDY06468 | Canola | mitochondrion | 76.58 | 81.76 |
| Bra013997.1-P | Field mustard | mitochondrion | 74.68 | 81.38 |
| CDY47311 | Canola | mitochondrion | 74.05 | 81.25 |
| Bra037056.1-P | Field mustard | mitochondrion | 75.95 | 80.0 |
| CDY08312 | Canola | mitochondrion | 75.95 | 78.43 |
| AT3G23830.1 | Thale cress | mitochondrion, plastid | 62.03 | 72.06 |
| Solyc05g053780.2.1 | Tomato | mitochondrion | 65.82 | 64.6 |
| PGSC0003DMT400040748 | Potato | mitochondrion | 57.59 | 62.76 |
| VIT_05s0029g00440.t01 | Wine grape | mitochondrion, nucleus, plastid | 60.13 | 62.5 |
| KRG97345 | Soybean | mitochondrion | 55.06 | 61.7 |
| PGSC0003DMT400053017 | Potato | mitochondrion, plastid | 58.23 | 60.53 |
| Solyc09g092320.2.1 | Tomato | mitochondrion, nucleus | 44.3 | 60.34 |
| Bra014000.1-P | Field mustard | mitochondrion | 82.28 | 58.56 |
| GSMUA_Achr7P02750_001 | Banana | mitochondrion | 53.8 | 56.67 |
| GSMUA_Achr4P16080_001 | Banana | mitochondrion | 60.13 | 50.0 |
| KRH31570 | Soybean | mitochondrion | 44.3 | 48.28 |
| AT4G13860.1 | Thale cress | cytosol | 25.95 | 47.13 |
| AT4G39260.1 | Thale cress | nucleus | 47.47 | 44.38 |
| AT2G21660.1 | Thale cress | nucleus | 48.1 | 43.18 |
| AT1G18630.1 | Thale cress | mitochondrion | 41.14 | 41.94 |
| AT3G46020.1 | Thale cress | mitochondrion | 22.15 | 34.31 |
| AT3G08000.1 | Thale cress | plastid | 31.01 | 34.27 |
| AT1G74230.1 | Thale cress | mitochondrion, plastid | 55.7 | 30.45 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 31.65 | 29.94 |
| AT5G06210.1 | Thale cress | mitochondrion | 27.22 | 29.45 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 20.89 | 29.2 |
| AT5G61030.1 | Thale cress | mitochondrion | 54.43 | 27.83 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 27.22 | 27.56 |
| AT5G59860.1 | Thale cress | nucleus | 24.68 | 24.84 |
| AT3G26420.1 | Thale cress | nucleus | 36.08 | 23.27 |
| AT2G27330.1 | Thale cress | mitochondrion | 15.82 | 21.55 |
| AT1G73530.1 | Thale cress | plastid | 22.15 | 19.34 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 32.28 | 16.45 |
| AT1G60650.2 | Thale cress | nucleus | 25.95 | 14.04 |
| AT3G20930.2 | Thale cress | plastid | 25.95 | 10.82 |
Protein Annotations
| MapMan:16.12.5.2 | MapMan:16.7.2 | Gene3D:3.30.70.330 | EntrezGene:827019 | UniProt:A0A178UU67 | ProteinID:AEE83333.1 |
| EMBL:AJ002892 | ArrayExpress:AT4G13850 | EnsemblPlantsGene:AT4G13850 | RefSeq:AT4G13850 | TAIR:AT4G13850 | RefSeq:AT4G13850-TAIR-G |
| EnsemblPlants:AT4G13850.1 | TAIR:AT4G13850.1 | Symbol:ATGRP2 | EMBL:AY072361 | EMBL:AY085621 | EMBL:BT002197 |
| ProteinID:CAB36849.1 | ProteinID:CAB78427.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003690 | GO:GO:0003697 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0006950 | GO:GO:0006970 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009409 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009631 | GO:GO:0009651 | GO:GO:0009791 |
| GO:GO:0009845 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0034336 | GO:GO:0060567 | InterPro:IPR000504 |
| InterPro:IPR012677 | RefSeq:NP_193121.1 | InterPro:Nucleotide-bd_a/b_plait_sf | ProteinID:OAO97546.1 | PFAM:PF00076 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50102 | PANTHER:PTHR44202 | UniProt:Q9SVM8 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0000001B18 | EMBL:X69377 | EMBL:Z18189 |
| SEG:seg | : | : | : | : | : |
Description
RBG2Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
Coordinates
chr4:+:8020713..8022476
Molecular Weight (calculated)
15703.3 Da
IEP (calculated)
7.509
GRAVY (calculated)
-0.294
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSGG GGGYGGGGGG YGGGGGGYGG GGDGGGGF
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSGG GGGYGGGGGG YGGGGGGYGG GGDGGGGF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.