Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47311 | Canola | mitochondrion | 95.36 | 100.0 |
| CDY47314 | Canola | mitochondrion | 98.01 | 98.67 |
| CDY06468 | Canola | mitochondrion | 87.42 | 89.19 |
| CDY08312 | Canola | mitochondrion | 86.75 | 85.62 |
| AT4G13850.1 | Thale cress | mitochondrion | 82.12 | 78.48 |
| Bra014000.1-P | Field mustard | mitochondrion | 99.34 | 67.57 |
| Solyc09g092320.2.1 | Tomato | mitochondrion, nucleus | 47.68 | 62.07 |
| PGSC0003DMT400040748 | Potato | mitochondrion | 58.94 | 61.38 |
| KRG97345 | Soybean | mitochondrion | 56.29 | 60.28 |
| Solyc05g053780.2.1 | Tomato | mitochondrion | 63.58 | 59.63 |
| VIT_05s0029g00440.t01 | Wine grape | mitochondrion, nucleus, plastid | 58.94 | 58.55 |
| GSMUA_Achr7P02750_001 | Banana | mitochondrion | 56.29 | 56.67 |
| PGSC0003DMT400053017 | Potato | mitochondrion, plastid | 55.63 | 55.26 |
| GSMUA_Achr4P16080_001 | Banana | mitochondrion | 62.91 | 50.0 |
| CDY41969 | Canola | cytosol | 41.06 | 48.44 |
| CDY46213 | Canola | nucleus | 39.07 | 48.36 |
| KRH31570 | Soybean | mitochondrion | 45.03 | 46.9 |
| CDY42616 | Canola | cytosol | 47.68 | 45.86 |
| CDX90323 | Canola | plastid | 47.68 | 43.64 |
| CDY70933 | Canola | nucleus | 47.68 | 42.86 |
| CDY15876 | Canola | nucleus | 47.68 | 42.6 |
| CDY59763 | Canola | nucleus | 47.02 | 42.52 |
| CDX71276 | Canola | nucleus | 47.68 | 41.86 |
| CDY12133 | Canola | cytosol | 43.71 | 41.77 |
| CDY19230 | Canola | mitochondrion | 38.41 | 41.73 |
| CDY72366 | Canola | nucleus | 47.02 | 41.52 |
| CDY26743 | Canola | mitochondrion | 40.4 | 41.22 |
| CDX82164 | Canola | mitochondrion | 39.07 | 40.69 |
| CDY51614 | Canola | mitochondrion | 35.76 | 37.24 |
| CDY09244 | Canola | mitochondrion | 25.17 | 36.54 |
| CDY28003 | Canola | plastid | 33.11 | 34.72 |
| CDY31588 | Canola | nucleus | 17.22 | 33.33 |
| CDX74955 | Canola | plastid | 31.79 | 33.1 |
| CDX91368 | Canola | plastid | 31.79 | 33.1 |
| CDY35978 | Canola | mitochondrion, plastid | 29.8 | 31.47 |
| CDX82066 | Canola | cytosol, nucleus, plastid | 19.21 | 30.21 |
| CDY42426 | Canola | mitochondrion | 48.34 | 30.17 |
| CDY04982 | Canola | mitochondrion | 29.14 | 30.14 |
| CDY14089 | Canola | mitochondrion | 29.14 | 30.14 |
| CDY49123 | Canola | mitochondrion | 52.32 | 29.7 |
| CDX73070 | Canola | mitochondrion | 51.66 | 28.89 |
| CDX96526 | Canola | mitochondrion | 52.32 | 28.42 |
| CDY16825 | Canola | plastid | 49.01 | 28.14 |
| CDY42466 | Canola | plastid | 27.81 | 27.45 |
| CDY43035 | Canola | plastid | 27.81 | 27.45 |
| CDY64931 | Canola | plastid | 27.81 | 27.45 |
| CDY65478 | Canola | endoplasmic reticulum | 37.09 | 26.92 |
| CDY43820 | Canola | plastid | 27.81 | 26.75 |
| CDX83260 | Canola | mitochondrion | 20.53 | 23.13 |
| CDY31170 | Canola | mitochondrion, nucleus | 19.87 | 22.73 |
| CDY02175 | Canola | mitochondrion | 50.99 | 22.71 |
| CDX87197 | Canola | plastid | 49.01 | 22.49 |
| CDX83617 | Canola | nucleus | 33.77 | 21.98 |
| CDY13632 | Canola | nucleus | 34.44 | 21.76 |
| CDX71070 | Canola | mitochondrion | 21.85 | 21.71 |
| CDY52166 | Canola | nucleus | 34.44 | 21.4 |
| CDY48990 | Canola | nucleus | 34.44 | 21.4 |
| CDY11283 | Canola | nucleus | 30.46 | 15.03 |
| CDY34132 | Canola | nucleus | 22.52 | 13.33 |
| CDX80910 | Canola | nucleus | 21.85 | 12.64 |
| CDY19589 | Canola | plastid | 28.48 | 11.53 |
| CDY06395 | Canola | nucleus | 27.81 | 10.55 |
Protein Annotations
| MapMan:16.12.5.2 | MapMan:16.7.2 | Gene3D:3.30.70.330 | GO:A0A078IPS0 | UniProt:A0A078IPS0 | EnsemblPlants:CDY53035 |
| ProteinID:CDY53035 | ProteinID:CDY53035.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00008431001 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR44202 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EC22B9 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng24070DBnaCnng24070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPS0]
Coordinates
chrLK033156:-:68760..70044
Molecular Weight (calculated)
15320.8 Da
IEP (calculated)
6.683
GRAVY (calculated)
-0.365
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFCKNLGGL LRQGAVSQTG NVPVQSMLGS LRYMSTKLFV GGLSWGTDDQ SLREAFSNFG EVIDSKVIVD RETGRSRGFG FVNFSDESAA NAAISEMDGK
101: ELNGRNIRVN VANDRPSAPR AYGGGGGYGG GGGGYGGGGG GYGGGGDGGG Y
101: ELNGRNIRVN VANDRPSAPR AYGGGGGYGG GGGGYGGGGG GYGGGGDGGG Y
001: MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSYG GGGGGYGGGG GGYGGGGDGG GGF
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSYG GGGGGYGGGG GGYGGGGDGG GGF
Arabidopsis Description
RBG2Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.