Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 47.37 | 63.72 |
| CDY31588 | Canola | nucleus | 28.95 | 56.41 |
| VIT_05s0094g00380.t01 | Wine grape | mitochondrion | 34.21 | 47.27 |
| GSMUA_Achr2P19090_001 | Banana | mitochondrion | 30.92 | 44.34 |
| TraesCS3D01G539400.1 | Wheat | mitochondrion | 29.61 | 41.28 |
| TraesCS3A01G534200.1 | Wheat | mitochondrion | 29.61 | 41.28 |
| TraesCS3B01G610900.1 | Wheat | mitochondrion | 28.95 | 40.37 |
| TraesCS1A01G405700.1 | Wheat | mitochondrion | 28.95 | 39.64 |
| Os01t0974701-01 | Rice | mitochondrion | 28.95 | 37.93 |
| HORVU3Hr1G116710.1 | Barley | mitochondrion | 29.61 | 36.89 |
| Zm00001d041949_P001 | Maize | mitochondrion | 25.66 | 36.11 |
| KRH24832 | Soybean | endoplasmic reticulum | 32.24 | 34.75 |
| KRH24829 | Soybean | mitochondrion | 32.24 | 33.56 |
| PGSC0003DMT400070114 | Potato | endoplasmic reticulum, extracellular | 32.24 | 32.89 |
| EES02151 | Sorghum | mitochondrion, plastid | 28.95 | 30.14 |
| CDY46213 | Canola | nucleus | 20.39 | 25.41 |
| CDY19230 | Canola | mitochondrion | 21.71 | 23.74 |
| CDY06468 | Canola | mitochondrion | 23.03 | 23.65 |
| CDY28003 | Canola | plastid | 22.37 | 23.61 |
| CDY35978 | Canola | mitochondrion, plastid | 21.71 | 23.08 |
| CDY09244 | Canola | mitochondrion | 15.79 | 23.08 |
| CDY26743 | Canola | mitochondrion | 22.37 | 22.97 |
| CDY47311 | Canola | mitochondrion | 21.71 | 22.92 |
| CDY08312 | Canola | mitochondrion | 23.03 | 22.88 |
| CDX82164 | Canola | mitochondrion | 21.05 | 22.07 |
| CDY47314 | Canola | mitochondrion | 21.71 | 22.0 |
| CDX82066 | Canola | cytosol, nucleus, plastid | 13.82 | 21.88 |
| CDY53035 | Canola | mitochondrion | 21.71 | 21.85 |
| CDY14089 | Canola | mitochondrion | 20.39 | 21.23 |
| CDY04982 | Canola | mitochondrion | 20.39 | 21.23 |
| KRH40931 | Soybean | mitochondrion | 31.58 | 20.78 |
| CDX91368 | Canola | plastid | 19.74 | 20.69 |
| CDY31170 | Canola | mitochondrion, nucleus | 17.76 | 20.45 |
| CDY41969 | Canola | cytosol | 17.11 | 20.31 |
| CDX83260 | Canola | mitochondrion | 17.76 | 20.15 |
| CDX74955 | Canola | plastid | 19.08 | 20.0 |
| CDY42466 | Canola | plastid | 19.74 | 19.61 |
| CDY43035 | Canola | plastid | 19.74 | 19.61 |
| CDY64931 | Canola | plastid | 19.74 | 19.61 |
| CDY51614 | Canola | mitochondrion | 18.42 | 19.31 |
| CDY43820 | Canola | plastid | 19.74 | 19.11 |
| CDX71276 | Canola | nucleus | 19.74 | 17.44 |
| CDY59763 | Canola | nucleus | 19.08 | 17.37 |
| CDY42616 | Canola | cytosol | 17.76 | 17.2 |
| CDY15876 | Canola | nucleus | 19.08 | 17.16 |
| CDY72366 | Canola | nucleus | 19.08 | 16.96 |
| CDY70933 | Canola | nucleus | 18.42 | 16.67 |
| CDY12133 | Canola | cytosol | 16.45 | 15.82 |
| CDX90323 | Canola | plastid | 17.11 | 15.76 |
| CDY42426 | Canola | mitochondrion | 23.03 | 14.46 |
| CDY16825 | Canola | plastid | 24.34 | 14.07 |
| CDY65478 | Canola | endoplasmic reticulum | 18.42 | 13.46 |
| CDY49123 | Canola | mitochondrion | 23.03 | 13.16 |
| CDX73070 | Canola | mitochondrion | 23.03 | 12.96 |
| CDX96526 | Canola | mitochondrion | 23.03 | 12.59 |
| CDX83617 | Canola | nucleus | 18.42 | 12.07 |
| CDY13632 | Canola | nucleus | 18.42 | 11.72 |
| CDY48990 | Canola | nucleus | 18.42 | 11.52 |
| CDX87197 | Canola | plastid | 24.34 | 11.25 |
| CDY52166 | Canola | nucleus | 17.76 | 11.11 |
| CDY02175 | Canola | mitochondrion | 24.34 | 10.91 |
| CDY19589 | Canola | plastid | 21.71 | 8.85 |
| CDY06395 | Canola | nucleus | 21.71 | 8.29 |
| CDY11283 | Canola | nucleus | 14.47 | 7.19 |
| CDY34132 | Canola | nucleus | 8.55 | 5.1 |
| CDX80910 | Canola | nucleus | 5.92 | 3.45 |
Protein Annotations
| EnsemblPlants:CDX71070 | EnsemblPlantsGene:GSBRNA2T00141021001 | Gene3D:3.30.70.330 | GO:A0A078C2J4 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR45502 | PFAM:PF00076 | PFscan:PS50102 | ProteinID:CDX71070 | ProteinID:CDX71070.1 | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0004EECD25 | MapMan:35.2 | : | : | : |
Description
BnaC03g11540D
Coordinates
chrLK031791:+:3528346..3529996
Molecular Weight (calculated)
17373.1 Da
IEP (calculated)
10.113
GRAVY (calculated)
-0.108
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVSQCARRM YLSSSLRHLT TTRGSCSKLF VGGLSYDTNE PVLKNEFGKY GEVLHVRVIC DHRSGKSKGY GFVVFDSEEA AATALASMDN QVKHQKLKTL
101: HLLFRIVTVY NSNSLVQLRL FDVSRRDLRG CHFRFQGIKT LRFSIEIITL FD
101: HLLFRIVTVY NSNSLVQLRL FDVSRRDLRG CHFRFQGIKT LRFSIEIITL FD
001: MFSSLFVRCN SITSPLRCFA IRGSCSKLFV GGLSYDTNEP VLKNEFEKYG EIIEVKVICD HKSGKSKGYG FVLFDSEEAA ASALASMDNQ LLEGRNIRVE
101: YAQPKRSLYQ NPK
101: YAQPKRSLYQ NPK
Arabidopsis Description
Glycine-rich RNA-binding-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BEY1]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.