Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- plastid 3
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041949_P001 | Maize | mitochondrion | 54.79 | 74.07 |
| TraesCS3B01G610900.1 | Wheat | mitochondrion | 45.89 | 61.47 |
| TraesCS3A01G534200.1 | Wheat | mitochondrion | 45.21 | 60.55 |
| TraesCS3D01G539400.1 | Wheat | mitochondrion | 45.21 | 60.55 |
| Os01t0974701-01 | Rice | mitochondrion | 47.95 | 60.34 |
| TraesCS1A01G405700.1 | Wheat | mitochondrion | 41.78 | 54.95 |
| HORVU3Hr1G116710.1 | Barley | mitochondrion | 43.84 | 52.46 |
| GSMUA_Achr2P19090_001 | Banana | mitochondrion | 36.3 | 50.0 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 34.25 | 44.25 |
| CDY31588 | Canola | nucleus | 23.29 | 43.59 |
| VIT_05s0094g00380.t01 | Wine grape | mitochondrion | 32.19 | 42.73 |
| KRH24829 | Soybean | mitochondrion | 37.67 | 37.67 |
| KRH24832 | Soybean | endoplasmic reticulum | 30.14 | 31.21 |
| KXG36665 | Sorghum | mitochondrion | 21.23 | 29.52 |
| CDX71070 | Canola | mitochondrion | 30.14 | 28.95 |
| PGSC0003DMT400070114 | Potato | endoplasmic reticulum, extracellular | 28.77 | 28.19 |
| EES10764 | Sorghum | mitochondrion | 24.66 | 26.67 |
| Bra025674.1-P | Field mustard | mitochondrion | 25.34 | 25.52 |
| EER97356 | Sorghum | plastid | 22.6 | 25.19 |
| KRH40931 | Soybean | mitochondrion | 37.67 | 23.81 |
| EES01954 | Sorghum | plastid | 23.97 | 23.81 |
| EES14515 | Sorghum | plastid | 21.23 | 22.14 |
| KXG37870 | Sorghum | nucleus | 25.34 | 21.76 |
| OQU88096 | Sorghum | cytosol, mitochondrion, nucleus | 9.59 | 21.54 |
| KXG32985 | Sorghum | cytosol, mitochondrion, nucleus | 9.59 | 20.9 |
| EES16438 | Sorghum | nucleus | 23.29 | 20.61 |
| Solyc10g081180.1.1 | Tomato | nucleus | 26.71 | 17.73 |
| KXG26990 | Sorghum | plastid | 17.81 | 17.69 |
| KXG37189 | Sorghum | nucleus | 22.6 | 16.58 |
| EER92461 | Sorghum | plastid | 19.18 | 16.57 |
| Bra008020.1-P | Field mustard | endoplasmic reticulum | 22.6 | 15.87 |
| EES16016 | Sorghum | mitochondrion | 24.66 | 14.4 |
| KXG24163 | Sorghum | nucleus | 21.23 | 14.22 |
| Bra008142.1-P | Field mustard | mitochondrion | 23.29 | 12.88 |
| Bra015926.1-P | Field mustard | mitochondrion | 24.66 | 12.63 |
| OQU88590 | Sorghum | nucleus | 25.34 | 12.29 |
| KXG36643 | Sorghum | mitochondrion | 25.34 | 11.71 |
| KXG37841 | Sorghum | nucleus | 19.18 | 8.86 |
| KXG30823 | Sorghum | plastid | 22.6 | 8.23 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:8074141 | UniProt:C5XJF1 | EnsemblPlants:EES02151 | ProteinID:EES02151 |
| ProteinID:EES02151.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR15241 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | EnsemblPlantsGene:SORBI_3003G445100 | SUPFAM:SSF54928 | unigene:Sbi.6596 | UniParc:UPI0001A84D15 |
| RefSeq:XP_002457031.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:74310197..74312158
Molecular Weight (calculated)
15255.9 Da
IEP (calculated)
9.697
GRAVY (calculated)
-0.221
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKLKLLLN RRAGGGCCCL RNGNGNGNGN GNAALPFPFT FPFPNGNRST ATSSACSSSN LFIGGLSYDT NETALKDAFS QYGDVIAVRV ICHPTTGKSK
101: GFGFVKFSSE NQAAAALQKL NGQVLDGRNI RVHYANSTWG SAATDG
101: GFGFVKFSSE NQAAAALQKL NGQVLDGRNI RVHYANSTWG SAATDG
001: MFSSLFVRCN SITSPLRCFA IRGSCSKLFV GGLSYDTNEP VLKNEFEKYG EIIEVKVICD HKSGKSKGYG FVLFDSEEAA ASALASMDNQ LLEGRNIRVE
101: YAQPKRSLYQ NPK
101: YAQPKRSLYQ NPK
Arabidopsis Description
Glycine-rich RNA-binding-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BEY1]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.