Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 4
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012052_P001 | Maize | mitochondrion, plastid | 82.31 | 77.56 |
| Os01t0916600-01 | Rice | mitochondrion | 67.35 | 66.0 |
| HORVU3Hr1G093400.1 | Barley | plastid | 65.99 | 57.74 |
| TraesCS3A01G422600.1 | Wheat | nucleus | 66.67 | 56.65 |
| TraesCS3B01G457900.1 | Wheat | plastid | 66.67 | 56.0 |
| TraesCS3D01G417800.1 | Wheat | plastid | 65.99 | 55.11 |
| EES16438 | Sorghum | nucleus | 40.82 | 36.36 |
| OQU88096 | Sorghum | cytosol, mitochondrion, nucleus | 15.65 | 35.38 |
| KXG37870 | Sorghum | nucleus | 40.82 | 35.29 |
| EES10764 | Sorghum | mitochondrion | 31.97 | 34.81 |
| EER97356 | Sorghum | plastid | 30.61 | 34.35 |
| KXG36665 | Sorghum | mitochondrion | 23.81 | 33.33 |
| KXG32985 | Sorghum | cytosol, mitochondrion, nucleus | 14.97 | 32.84 |
| EES16016 | Sorghum | mitochondrion | 53.74 | 31.6 |
| EES14515 | Sorghum | plastid | 27.89 | 29.29 |
| EER92461 | Sorghum | plastid | 29.93 | 26.04 |
| KXG26990 | Sorghum | plastid | 25.85 | 25.85 |
| KXG37189 | Sorghum | nucleus | 34.69 | 25.63 |
| EES02151 | Sorghum | mitochondrion, plastid | 23.81 | 23.97 |
| KXG36643 | Sorghum | mitochondrion | 48.3 | 22.47 |
| KXG24163 | Sorghum | nucleus | 30.61 | 20.64 |
| OQU88590 | Sorghum | nucleus | 35.37 | 17.28 |
| KXG37841 | Sorghum | nucleus | 34.69 | 16.14 |
| KXG30823 | Sorghum | plastid | 26.53 | 9.73 |
Protein Annotations
| MapMan:16.12.5.2 | Gene3D:3.30.70.330 | EntrezGene:8078726 | UniProt:C5XG78 | EnsemblPlants:EES01954 | ProteinID:EES01954 |
| ProteinID:EES01954.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44202 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | EnsemblPlantsGene:SORBI_3003G401400 | SUPFAM:SSF54928 | unigene:Sbi.18029 | UniParc:UPI00016FEB0C |
| RefSeq:XP_002456834.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:70982034..70984335
Molecular Weight (calculated)
14827.3 Da
IEP (calculated)
9.777
GRAVY (calculated)
-0.232
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFNKLGSL LRHSALASGV AASSSPAVFN AARLMSTKLF VGGLSWGVDD MKLREAFSGF GDVTEARVIT DRDTGKSRGF GFVNYTSSDA ANAAISGMDG
101: KEIDGRPVRV NIANDRPAGN RGGGGYGGGG FGGGGYGGGN QSYGGGY
101: KEIDGRPVRV NIANDRPAGN RGGGGYGGGG FGGGGYGGGN QSYGGGY
001: MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE
101: LNGRHIRVNP ANDRPSGGYG GGGDGGGGF
101: LNGRHIRVNP ANDRPSGGYG GGGDGGGGF
Arabidopsis Description
RBG2Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.