CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 4
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0549800-01	Rice	mitochondrion	84.73	83.46
TraesCS2D01G217900.1	Wheat	mitochondrion	84.73	79.29
TraesCS2A01G212000.1	Wheat	mitochondrion	84.73	79.29
TraesCS2B01G237100.1	Wheat	mitochondrion	83.97	79.14
HORVU2Hr1G042560.2	Barley	mitochondrion	83.21	65.66
Zm00001d006566_P002	Maize	mitochondrion	53.44	60.87
EES14515	Sorghum	plastid	62.6	58.57
KXG36665	Sorghum	mitochondrion	31.3	39.05
PGSC0003DMT400056141	Potato	mitochondrion	42.75	37.84
Solyc06g035610.2.1	Tomato	mitochondrion	41.22	37.5
EER92461	Sorghum	plastid	42.75	33.14
EES10764	Sorghum	mitochondrion	33.59	32.59
KXG26990	Sorghum	plastid	35.11	31.29
OQU88096	Sorghum	cytosol, mitochondrion, nucleus	15.27	30.77
EES01954	Sorghum	plastid	34.35	30.61
KXG32985	Sorghum	cytosol, mitochondrion, nucleus	14.5	28.36
EES16438	Sorghum	nucleus	29.77	23.64
KXG37870	Sorghum	nucleus	30.53	23.53
EES02151	Sorghum	mitochondrion, plastid	25.19	22.6
KXG37189	Sorghum	nucleus	31.3	20.6
KXG24163	Sorghum	nucleus	32.06	19.27
EES16016	Sorghum	mitochondrion	36.64	19.2
KXG36643	Sorghum	mitochondrion	35.11	14.56
OQU88590	Sorghum	nucleus	27.48	11.96
KXG37841	Sorghum	nucleus	25.19	10.44
KXG30823	Sorghum	plastid	30.53	9.98

Protein Annotations

MapMan:16.12.5.2	Gene3D:3.30.70.330	EntrezGene:8081727	UniProt:C5XAW4	EnsemblPlants:EER97356	ProteinID:EER97356
ProteinID:EER97356.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504
InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFscan:PS50102	PANTHER:PTHR15241	PANTHER:PTHR15241:SF8
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	EnsemblPlantsGene:SORBI_3002G332900	SUPFAM:SSF54928	UniParc:UPI0001A83641
RefSeq:XP_002460835.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:70129676..70133200

Molecular Weight (calculated)

14090.7 Da

IEP (calculated)

9.973

GRAVY (calculated)

-0.220

Length

131 amino acids

Sequence
(BLAST)

001: MAVAAAARAG FRRLFSVSAF AAPPPPAARP AAEPCNNLFV SGLNKRTTSN GLKEAFSKFG QVIEARVITD RISGYSRGFG FVKYATVQEA GEAIKGMDGK
101: FLDGWVIFAE YAKQREATQP SQQGAPYEYS S

Best Arabidopsis Sequence Match ( AT5G54580.1 )
(BLAST)

001: MAMAMRLPAI SRAVTEVASA PVGLRRLFCS NASRFSFLSP QAESQTPARP QAEPSTNLFV SGLSKRTTSE GLRTAFAQFG EVADAKVVTD RVSGYSKGFG
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR

Arabidopsis Description

ORRM2Organelle RRM domain-containing protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FIU6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.