Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G237100.1 | Wheat | mitochondrion | 81.93 | 97.84 |
| TraesCS2D01G217900.1 | Wheat | mitochondrion | 81.33 | 96.43 |
| TraesCS2A01G212000.1 | Wheat | mitochondrion | 80.72 | 95.71 |
| Os07t0549800-01 | Rice | mitochondrion | 68.67 | 85.71 |
| EER97356 | Sorghum | plastid | 65.66 | 83.21 |
| Zm00001d006566_P002 | Maize | mitochondrion | 38.55 | 55.65 |
| PGSC0003DMT400056141 | Potato | mitochondrion | 37.95 | 42.57 |
| Solyc06g035610.2.1 | Tomato | mitochondrion | 36.14 | 41.67 |
| HORVU4Hr1G059000.4 | Barley | plastid | 33.73 | 29.02 |
| HORVU2Hr1G073330.9 | Barley | cytosol, nucleus | 23.49 | 28.68 |
| HORVU3Hr1G093400.1 | Barley | plastid | 28.92 | 28.57 |
| HORVU5Hr1G089190.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 15.66 | 26.26 |
| HORVU3Hr1G116710.1 | Barley | mitochondrion | 16.87 | 22.95 |
| HORVU6Hr1G055440.1 | Barley | nucleus | 22.29 | 22.84 |
| HORVU5Hr1G002150.1 | Barley | nucleus | 20.48 | 19.65 |
| HORVU5Hr1G110370.1 | Barley | mitochondrion | 28.31 | 16.04 |
| HORVU7Hr1G078140.5 | Barley | nucleus | 21.69 | 15.65 |
| HORVU3Hr1G094330.2 | Barley | mitochondrion | 25.9 | 14.05 |
| HORVU5Hr1G118010.1 | Barley | mitochondrion, nucleus | 21.08 | 11.22 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G042560.2 | EnsemblPlantsGene:HORVU2Hr1G042560 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR15241 | PANTHER:PTHR15241:SF8 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000B46571A | UniProt:A0A287HU25 | MapMan:16.12.5.2 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:214723073..214745772
Molecular Weight (calculated)
18216.6 Da
IEP (calculated)
11.021
GRAVY (calculated)
-0.502
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: VNRHKRKPFR RSIRPFLAPL SPPTHRDMAA VAARAGAARV GFRRMFSVSA FAPPPPPTAR PAAEPCNNLF VSGLNKRTTS DGLREAFSKF GQVTDARVIT
101: DRISGYSRGF GFVKYATVEE AAEGIKGMDG KFFDGWVIFA EYAKQREAQQ PPQSAGTQSS GYQYPS
101: DRISGYSRGF GFVKYATVEE AAEGIKGMDG KFFDGWVIFA EYAKQREAQQ PPQSAGTQSS GYQYPS
001: MAMAMRLPAI SRAVTEVASA PVGLRRLFCS NASRFSFLSP QAESQTPARP QAEPSTNLFV SGLSKRTTSE GLRTAFAQFG EVADAKVVTD RVSGYSKGFG
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
Arabidopsis Description
ORRM2Organelle RRM domain-containing protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FIU6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.