Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 1
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056141 | Potato | mitochondrion | 90.97 | 88.51 |
| Solyc07g063900.2.1 | Tomato | plastid | 49.31 | 47.02 |
| TraesCS2D01G217900.1 | Wheat | mitochondrion | 42.36 | 43.57 |
| TraesCS2A01G212000.1 | Wheat | mitochondrion | 42.36 | 43.57 |
| TraesCS2B01G237100.1 | Wheat | mitochondrion | 41.67 | 43.17 |
| Os07t0549800-01 | Rice | mitochondrion | 38.19 | 41.35 |
| EER97356 | Sorghum | plastid | 37.5 | 41.22 |
| Solyc10g084630.1.1 | Tomato | mitochondrion | 36.11 | 37.68 |
| HORVU2Hr1G042560.2 | Barley | mitochondrion | 41.67 | 36.14 |
| Zm00001d006566_P002 | Maize | mitochondrion | 28.47 | 35.65 |
| Solyc09g011210.2.1 | Tomato | plastid | 29.17 | 31.82 |
| Solyc10g083240.1.1 | Tomato | mitochondrion | 27.78 | 31.01 |
| Solyc09g092320.2.1 | Tomato | mitochondrion, nucleus | 24.31 | 30.17 |
| Solyc10g051390.1.1 | Tomato | nucleus | 20.83 | 25.42 |
| Solyc05g053780.2.1 | Tomato | mitochondrion | 25.69 | 22.98 |
| Solyc10g051380.1.1 | Tomato | nucleus | 20.14 | 22.31 |
| Solyc07g049270.2.1 | Tomato | mitochondrion | 20.14 | 20.57 |
| Solyc02g066930.2.1 | Tomato | nucleus | 26.39 | 17.59 |
| Solyc01g109660.2.1 | Tomato | extracellular | 20.83 | 17.14 |
| Solyc10g081180.1.1 | Tomato | nucleus | 25.0 | 16.36 |
| Solyc01g104840.2.1 | Tomato | nucleus | 20.83 | 13.45 |
| Solyc10g047130.1.1 | Tomato | nucleus | 21.53 | 12.97 |
| Solyc02g088790.2.1 | Tomato | extracellular, plastid | 27.08 | 10.46 |
| Solyc03g071560.2.1 | Tomato | nucleus | 21.53 | 9.87 |
| Solyc11g007160.1.1 | Tomato | plastid | 26.39 | 9.5 |
| Solyc11g008210.1.1 | Tomato | nucleus | 11.81 | 5.76 |
Protein Annotations
| EnsemblPlants:Solyc06g035610.2.1 | EnsemblPlantsGene:Solyc06g035610.2 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR45392 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0002765D4C | UniProt:K4C4T3 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6:+:24665930..24667163
Molecular Weight (calculated)
15499.5 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.072
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRAAAAVR IPVAPRGLRA VFYSFSANVP LYQPRTGSPP EPSTKLYVSG LSKHTTSESL RNAFSEYGEV LDAKVLTDGI TGYSTCCGYV RYQTMEESAA
101: GLEAMDGQFL DGLVIVAEYA KPKPRHPALE DGRCGFASVS DMLI
101: GLEAMDGQFL DGLVIVAEYA KPKPRHPALE DGRCGFASVS DMLI
001: MAMAMRLPAI SRAVTEVASA PVGLRRLFCS NASRFSFLSP QAESQTPARP QAEPSTNLFV SGLSKRTTSE GLRTAFAQFG EVADAKVVTD RVSGYSKGFG
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
Arabidopsis Description
ORRM2Organelle RRM domain-containing protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FIU6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.