Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24829 | Soybean | mitochondrion | 60.28 | 58.22 |
| VIT_05s0094g00380.t01 | Wine grape | mitochondrion | 35.46 | 45.45 |
| GSMUA_Achr2P19090_001 | Banana | mitochondrion | 34.04 | 45.28 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 36.17 | 45.13 |
| Os01t0974701-01 | Rice | mitochondrion | 32.62 | 39.66 |
| TraesCS1A01G405700.1 | Wheat | mitochondrion | 31.21 | 39.64 |
| TraesCS3B01G610900.1 | Wheat | mitochondrion | 30.5 | 39.45 |
| TraesCS3A01G534200.1 | Wheat | mitochondrion | 30.5 | 39.45 |
| TraesCS3D01G539400.1 | Wheat | mitochondrion | 29.79 | 38.53 |
| HORVU3Hr1G116710.1 | Barley | mitochondrion | 33.33 | 38.52 |
| CDY31588 | Canola | nucleus | 20.57 | 37.18 |
| KRH40931 | Soybean | mitochondrion | 58.87 | 35.93 |
| KRH23034 | Soybean | mitochondrion | 21.28 | 34.88 |
| Zm00001d041949_P001 | Maize | mitochondrion | 25.53 | 33.33 |
| CDX71070 | Canola | mitochondrion | 34.75 | 32.24 |
| PGSC0003DMT400070114 | Potato | endoplasmic reticulum, extracellular | 33.33 | 31.54 |
| KRH10291 | Soybean | nucleus | 16.31 | 31.08 |
| EES02151 | Sorghum | mitochondrion, plastid | 31.21 | 30.14 |
| KRH17905 | Soybean | cytosol, mitochondrion, nucleus | 17.02 | 28.92 |
| KRH67959 | Soybean | mitochondrion | 24.11 | 26.15 |
| KRH67547 | Soybean | mitochondrion | 25.53 | 25.9 |
| KRG95817 | Soybean | mitochondrion | 24.82 | 25.18 |
| KRH77758 | Soybean | mitochondrion | 19.86 | 24.78 |
| KRH29453 | Soybean | nucleus | 24.11 | 24.29 |
| Bra025674.1-P | Field mustard | mitochondrion | 24.11 | 23.45 |
| KRH27720 | Soybean | endoplasmic reticulum, mitochondrion | 15.6 | 22.68 |
| KRH55574 | Soybean | mitochondrion, plastid | 22.7 | 22.07 |
| KRH29452 | Soybean | nucleus | 24.11 | 21.79 |
| KRH25927 | Soybean | mitochondrion, plastid | 21.99 | 21.38 |
| KRH29451 | Soybean | nucleus | 25.53 | 21.05 |
| KRH29454 | Soybean | nucleus | 24.82 | 20.59 |
| KRG97345 | Soybean | mitochondrion | 20.57 | 20.57 |
| KRH50325 | Soybean | vacuole | 19.86 | 20.0 |
| KRH51528 | Soybean | nucleus | 25.53 | 19.78 |
| KRH60842 | Soybean | mitochondrion | 25.53 | 19.46 |
| KRH31570 | Soybean | mitochondrion | 19.86 | 19.31 |
| KRH42209 | Soybean | endoplasmic reticulum | 22.7 | 18.18 |
| KRH09475 | Soybean | plastid | 22.7 | 17.78 |
| Solyc10g081180.1.1 | Tomato | nucleus | 24.82 | 15.91 |
| Bra008020.1-P | Field mustard | endoplasmic reticulum | 23.4 | 15.87 |
| KRH58335 | Soybean | nucleus | 22.7 | 15.38 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 24.82 | 14.34 |
| KRH45033 | Soybean | nucleus, plastid | 24.11 | 13.88 |
| Bra008142.1-P | Field mustard | mitochondrion | 24.11 | 12.88 |
| KRH38934 | Soybean | plastid | 13.48 | 12.34 |
| Bra015926.1-P | Field mustard | mitochondrion | 24.11 | 11.93 |
| KRH56813 | Soybean | mitochondrion | 22.7 | 11.68 |
| KRH03133 | Soybean | nucleus | 22.7 | 11.64 |
| KRG92035 | Soybean | plastid | 28.37 | 10.26 |
| KRG90774 | Soybean | nucleus | 19.15 | 9.68 |
| KRH35987 | Soybean | nucleus | 13.48 | 6.57 |
| KRH54698 | Soybean | plastid | 19.86 | 4.15 |
Protein Annotations
| EMBL:ACUP02007187 | EnsemblPlants:KRH24832 | EnsemblPlantsGene:GLYMA_12G065300 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | PANTHER:PTHR45502 | PFAM:PF00076 | PFscan:PS50102 | ProteinID:KRH24832 | ProteinID:KRH24832.1 |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0006ED62BF | UniProt:A0A0R0H266 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr12:+:4802368..4803157
Molecular Weight (calculated)
15846.4 Da
IEP (calculated)
9.619
GRAVY (calculated)
0.116
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MCVISALVSH SALIFPLPRF LCTRHHSTTK LFVVGLSYNT NQLVLRDAFG QHGEIIEAKV LCDHVTGKSR GYRFVRFISE TTATTARKEM NGQILDLIFL
101: PFQIGRSDME QRVTFYKITC LSLLPNYSHS IPLSKQNAAV G
101: PFQIGRSDME QRVTFYKITC LSLLPNYSHS IPLSKQNAAV G
001: MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE
101: LNGRHIRVNP ANDRPSGGYG GGGDGGGGF
101: LNGRHIRVNP ANDRPSGGYG GGGDGGGGF
Arabidopsis Description
RBG2Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.