Factsheet for GSMUA_Achr2P19090_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G534200.1	Wheat	mitochondrion	58.49	56.88
TraesCS3D01G539400.1	Wheat	mitochondrion	57.55	55.96
TraesCS1A01G405700.1	Wheat	mitochondrion	58.49	55.86
TraesCS3B01G610900.1	Wheat	mitochondrion	56.6	55.05
Os01t0974701-01	Rice	mitochondrion	57.55	52.59
HORVU3Hr1G116710.1	Barley	mitochondrion	55.66	48.36
AT5G59865.1	Thale cress	mitochondrion, plastid	48.11	45.13
VIT_05s0094g00380.t01	Wine grape	mitochondrion	45.28	43.64
Zm00001d041949_P001	Maize	mitochondrion	40.57	39.81
CDY31588	Canola	nucleus	29.25	39.74
KRH24829	Soybean	mitochondrion	50.94	36.99
EES02151	Sorghum	mitochondrion, plastid	50.0	36.3
KRH24832	Soybean	endoplasmic reticulum	45.28	34.04
CDX71070	Canola	mitochondrion	44.34	30.92
PGSC0003DMT400070114	Potato	endoplasmic reticulum, extracellular	43.4	30.87
GSMUA_Achr6P35640_001	Banana	nucleus	35.85	27.34
GSMUA_Achr7P02750_001	Banana	mitochondrion	38.68	27.33
GSMUA_Achr6P34250_001	Banana	mitochondrion	27.36	26.36
Bra025674.1-P	Field mustard	mitochondrion	33.02	24.14
GSMUA_Achr11P...	Banana	mitochondrion	24.53	24.07
GSMUA_Achr7P27650_001	Banana	nucleus	30.19	24.06
GSMUA_Achr11P...	Banana	mitochondrion	29.25	23.48
KRH40931	Soybean	mitochondrion	49.06	22.51
GSMUA_Achr5P26410_001	Banana	cytosol, mitochondrion, nucleus	23.58	21.74
GSMUA_Achr4P16080_001	Banana	mitochondrion	37.74	21.05
GSMUA_Achr8P07380_001	Banana	mitochondrion	26.42	20.74
GSMUA_Achr8P05200_001	Banana	cytosol	30.19	20.65
GSMUA_Achr4P14550_001	Banana	nucleus	30.19	20.25
GSMUA_Achr5P15860_001	Banana	plastid	30.19	18.82
GSMUA_Achr3P30570_001	Banana	plasma membrane	30.19	18.82
GSMUA_Achr6P15340_001	Banana	plastid	31.13	18.75
Solyc10g081180.1.1	Tomato	nucleus	34.91	16.82
GSMUA_Achr9P07090_001	Banana	mitochondrion	35.85	15.97
Bra008020.1-P	Field mustard	endoplasmic reticulum	31.13	15.87
GSMUA_Achr5P26170_001	Banana	nucleus, peroxisome, plasma membrane	23.58	14.88
GSMUA_Achr3P22540_001	Banana	nucleus, peroxisome, plasma membrane	27.36	14.15
Bra008142.1-P	Field mustard	mitochondrion	34.91	14.02
GSMUA_Achr8P07840_001	Banana	mitochondrion, nucleus, plasma membrane	24.53	13.61
Bra015926.1-P	Field mustard	mitochondrion	35.85	13.33
GSMUA_Achr4P03230_001	Banana	mitochondrion	32.08	13.28
GSMUA_Achr2P12550_001	Banana	nucleus	27.36	12.95
GSMUA_Achr2P01230_001	Banana	nucleus	33.02	11.22
GSMUA_Achr4P22370_001	Banana	nucleus	30.19	10.29
GSMUA_Achr4P28550_001	Banana	cytosol, mitochondrion, nucleus	27.36	8.41

Protein Annotations

EnsemblPlants:GSMUA_Achr2P19090_001	EnsemblPlants:GSMUA_Achr2T19090_001	EnsemblPlantsGene:GSMUA_Achr2G19090_001	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf
InterPro:RRM_dom	PANTHER:PTHR45502	PFAM:PF00076	PFscan:PS50102	SMART:SM00360	SUPFAM:SSF54928
UniParc:UPI0002955CF7	UniProt:M0S9A0	MapMan:35.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G19090_001]

Coordinates

chr2:-:19267743..19270346

Molecular Weight (calculated)

12130.6 Da

IEP (calculated)

9.221

GRAVY (calculated)

-0.260

Length

106 amino acids

Sequence
(BLAST)

001: MRCWRVKDSW AAIIPARRLW LRHACSKLFV VGLSYDTNEI ALRDAFAEHG EVVEVKVICD RSTTSKSKGY GFVQFSSEKE ATIALQKMDG EFLDGRYIRV
101: HYANKG

Best Arabidopsis Sequence Match ( AT5G59865.1 )
(BLAST)

001: MFSSLFVRCN SITSPLRCFA IRGSCSKLFV GGLSYDTNEP VLKNEFEKYG EIIEVKVICD HKSGKSKGYG FVLFDSEEAA ASALASMDNQ LLEGRNIRVE
101: YAQPKRSLYQ NPK

Arabidopsis Description

Glycine-rich RNA-binding-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BEY1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.