Factsheet for GSMUA_Achr4P03230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0502200-01	Rice	mitochondrion	56.64	56.2
GSMUA_Achr9P07090_001	Banana	mitochondrion	50.39	54.2
EES16016	Sorghum	mitochondrion	51.17	52.4
GSMUA_Achr7P02750_001	Banana	mitochondrion	30.08	51.33
TraesCS3A01G428400.1	Wheat	mitochondrion	43.75	49.56
TraesCS3D01G424100.1	Wheat	mitochondrion	42.19	49.32
VIT_17s0000g07330.t01	Wine grape	plastid	52.73	48.74
KRH01278	Soybean	mitochondrion, nucleus, plastid	46.09	48.36
Zm00001d041750_P001	Maize	mitochondrion	49.22	48.28
GSMUA_Achr8P05200_001	Banana	cytosol	28.91	47.74
TraesCS3B01G465800.1	Wheat	mitochondrion	42.97	47.62
GSMUA_Achr3P30570_001	Banana	plasma membrane	31.25	47.06
GSMUA_Achr4P14550_001	Banana	nucleus	28.91	46.84
KRH45033	Soybean	nucleus, plastid	44.14	46.12
Zm00001d023734_P003	Maize	nucleus, plastid	51.56	45.99
GSMUA_Achr7P27650_001	Banana	nucleus	23.83	45.86
KRH03133	Soybean	nucleus	49.22	45.82
PGSC0003DMT400064758	Potato	mitochondrion	44.92	45.82
Solyc02g066930.2.1	Tomato	nucleus	38.28	45.37
Bra035944.1-P	Field mustard	plastid	46.48	45.25
CDY16825	Canola	plastid	46.09	44.87
AT5G61030.1	Thale cress	mitochondrion	52.73	43.69
KRH56813	Soybean	mitochondrion	46.09	43.07
HORVU5Hr1G110370.1	Barley	mitochondrion	49.22	43.0
Bra012986.1-P	Field mustard	mitochondrion	51.17	42.95
TraesCS5A01G460900.1	Wheat	mitochondrion	50.0	41.97
Os10t0321700-01	Rice	mitochondrion	51.95	41.96
TraesCS5B01G470700.1	Wheat	mitochondrion	50.0	41.69
TraesCS5D01G473100.1	Wheat	mitochondrion	49.61	41.5
Os07t0602600-01	Rice	mitochondrion	38.28	41.18
GSMUA_Achr4P16080_001	Banana	mitochondrion	30.08	40.53
Zm00001d022065_P001	Maize	mitochondrion	48.05	39.94
HORVU3Hr1G094330.2	Barley	mitochondrion	46.88	39.22
TraesCS2B01G203200.1	Wheat	mitochondrion	47.66	38.24
TraesCS2D01G184200.1	Wheat	mitochondrion	48.05	37.85
CDY02175	Canola	mitochondrion	50.0	37.76
KXG36643	Sorghum	mitochondrion	46.48	37.66
CDX87197	Canola	plastid	46.88	36.47
GSMUA_Achr6P34250_001	Banana	mitochondrion	14.45	33.64
PGSC0003DMT400003685	Potato	nucleus	39.06	33.0
GSMUA_Achr11P...	Banana	mitochondrion	13.67	32.41
GSMUA_Achr2P19090_001	Banana	mitochondrion	13.28	32.08
Solyc02g088790.2.1	Tomato	extracellular, plastid	44.53	30.56
GSMUA_Achr11P...	Banana	mitochondrion	15.62	30.3
GSMUA_Achr6P35640_001	Banana	nucleus	16.41	30.22
GSMUA_Achr8P07380_001	Banana	mitochondrion	15.62	29.63
GSMUA_Achr5P26410_001	Banana	cytosol, mitochondrion, nucleus	13.28	29.57
GSMUA_Achr6P15340_001	Banana	plastid	17.19	25.0
GSMUA_Achr2P12550_001	Banana	nucleus	21.88	25.0
GSMUA_Achr5P26170_001	Banana	nucleus, peroxisome, plasma membrane	15.62	23.81
GSMUA_Achr5P15860_001	Banana	plastid	15.23	22.94
GSMUA_Achr4P22370_001	Banana	nucleus	27.73	22.83
GSMUA_Achr8P07840_001	Banana	mitochondrion, nucleus, plasma membrane	16.41	21.99
GSMUA_Achr3P22540_001	Banana	nucleus, peroxisome, plasma membrane	17.58	21.95
GSMUA_Achr4P28550_001	Banana	cytosol, mitochondrion, nucleus	28.91	21.45
KRH54698	Soybean	plastid	44.92	17.06
TraesCS2A01G176700.1	Wheat	mitochondrion	48.05	16.78
GSMUA_Achr2P01230_001	Banana	nucleus	15.62	12.82

Protein Annotations

EnsemblPlants:GSMUA_Achr4P03230_001	EnsemblPlants:GSMUA_Achr4T03230_001	EnsemblPlantsGene:GSMUA_Achr4G03230_001	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf
InterPro:RRM_dom	PANTHER:PTHR44202	PFAM:PF00076	PFscan:PS50102	SEG:seg	SMART:SM00360
SUPFAM:SSF54928	UniParc:UPI0002957820	UniProt:M0SKP0	MapMan:16.12.5.2	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G03230_001]

Coordinates

chr4:-:2603270..2605138

Molecular Weight (calculated)

25137.0 Da

IEP (calculated)

4.749

GRAVY (calculated)

-0.593

Length

256 amino acids

Sequence
(BLAST)

001: MAFANRIGNL LKKSITSSPS LYQAIRCMSS SKIFIGGLSN GTDDQSLREA CTNYGEVVEA RVIMDRETGR SRSFGFVTFT SNEDASAAIS GMDGKDLHGR
101: MIRVNYATER TGGFRGGSYG GGDYGGGGYG GGGSGYGNMG GSYSGSSGSG GGYSSGGGYG GGGYGDGGSN NYGGSYNTGP AVGYDGTGGG YDNASDGGSY
201: GVAIGGGGGS YGGSNSGGVA EGGSNADYGR GTYGGSESTG FGSSFSNNGG YGNNNQ

Best Arabidopsis Sequence Match ( AT5G61030.2 )
(BLAST)

001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA

Arabidopsis Description

RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.