Factsheet for Zm00001d041750_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16016	Sorghum	mitochondrion	78.16	81.6
Zm00001d023734_P003	Maize	nucleus, plastid	78.54	71.43
Os12t0502200-01	Rice	mitochondrion	66.28	67.05
TraesCS3D01G424100.1	Wheat	mitochondrion	55.17	65.75
TraesCS3A01G428400.1	Wheat	mitochondrion	55.56	64.16
TraesCS3B01G465800.1	Wheat	mitochondrion	55.56	62.77
GSMUA_Achr9P07090_001	Banana	mitochondrion	50.96	55.88
Zm00001d012052_P001	Maize	mitochondrion, plastid	33.33	55.77
HORVU3Hr1G094330.2	Barley	mitochondrion	62.07	52.94
GSMUA_Achr4P03230_001	Banana	mitochondrion	48.28	49.22
Zm00001d031168_P001	Maize	plastid	28.74	48.39
Zm00001d041246_P001	Maize	nucleus	26.44	47.59
VIT_17s0000g07330.t01	Wine grape	plastid	50.19	47.29
Solyc02g066930.2.1	Tomato	nucleus	37.93	45.83
Zm00001d013568_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	27.59	45.28
KRH01278	Soybean	mitochondrion, nucleus, plastid	41.76	44.67
PGSC0003DMT400064758	Potato	mitochondrion	42.91	44.62
Bra035944.1-P	Field mustard	plastid	44.06	43.73
CDY16825	Canola	plastid	43.3	42.97
KRH56813	Soybean	mitochondrion	44.83	42.7
KRH03133	Soybean	nucleus	44.83	42.55
KRH45033	Soybean	nucleus, plastid	39.46	42.04
AT5G61030.1	Thale cress	mitochondrion	49.04	41.42
Bra012986.1-P	Field mustard	mitochondrion	47.51	40.66
Zm00001d022065_P001	Maize	mitochondrion	47.13	39.94
CDX87197	Canola	plastid	44.83	35.56
CDY02175	Canola	mitochondrion	45.98	35.4
PGSC0003DMT400003685	Potato	nucleus	38.31	33.0
Zm00001d006566_P002	Maize	mitochondrion	14.18	32.17
Zm00001d034768_P005	Maize	nucleus	24.52	31.22
Zm00001d024675_P001	Maize	mitochondrion	16.48	30.71
Solyc02g088790.2.1	Tomato	extracellular, plastid	42.53	29.76
Zm00001d041949_P001	Maize	mitochondrion	11.49	27.78
Zm00001d026016_P002	Maize	plastid	15.71	27.33
Zm00001d028661_P001	Maize	plastid	16.86	26.51
Zm00001d019041_P001	Maize	extracellular, plasma membrane	26.05	23.21
Zm00001d033511_P002	Maize	cytosol, mitochondrion, nucleus	26.05	22.9
Zm00001d013543_P009	Maize	extracellular, mitochondrion, plasma membrane	26.82	22.51
Zm00001d007799_P001	Maize	mitochondrion, plastid	26.44	17.97
KRH54698	Soybean	plastid	45.59	17.66
Zm00001d017930_P003	Maize	plastid	15.71	9.98

Protein Annotations

EntrezGene:100191146	MapMan:16.12.5.2	Gene3D:3.30.70.330	UniProt:A0A1D6MXZ7	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	ProteinID:ONM33600.1
PFAM:PF00076	PRINTS:PR01228	PFscan:PS50102	PANTHER:PTHR44202	InterPro:RBD_domain_sf	InterPro:RRM_dom
SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI0008424ED9	EnsemblPlantsGene:Zm00001d041750	EnsemblPlants:Zm00001d041750_P001	EnsemblPlants:Zm00001d041750_T001
SEG:seg	:	:	:	:	:

Description

Glycine-rich RNA-binding protein 3 mitochondrial

Coordinates

chr3:-:135903549..135907349

Molecular Weight (calculated)

25977.1 Da

IEP (calculated)

4.589

GRAVY (calculated)

-0.642

Length

261 amino acids

Sequence
(BLAST)

001: MALANKLGGL LKKATSSNPS VYQAIRCMSS KLFVGGISYQ TDDHSLRDEF AKYGQVIEAR IIIDRESGRS RGFGFVTYTS SEEASAAITA LDGKYINADI
101: KTLDGRSIRV NHANEKTGGF RGGGGYGGGG YGGGGGYGGA GGGGGYGGGH YGGGGGSGGY GGGDYGGNYS NRGGGGDYGV AGGGGGNFTA GGSDSFANSN
201: FGSDSSFGGN GAGGFDATGG STGDDGFSGT PDDNFGGNKN EETMDDIFKD DEPDSYADKR S

Best Arabidopsis Sequence Match ( AT5G61030.1 )
(BLAST)

001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA

Arabidopsis Description

RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.