Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27330.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT2G27330.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77758 | Soybean | mitochondrion | 74.23 | 63.72 |
| KRH10291 | Soybean | nucleus | 29.9 | 39.19 |
| VIT_06s0080g00870.t01 | Wine grape | plastid | 44.33 | 38.74 |
| KRH23034 | Soybean | mitochondrion | 31.96 | 36.05 |
| Os04t0414300-00 | Rice | mitochondrion | 45.36 | 32.12 |
| HORVU2Hr1G073330.9 | Barley | cytosol, nucleus | 44.33 | 31.62 |
| AT2G27330.1 | Thale cress | mitochondrion | 37.11 | 31.03 |
| TraesCS2D01G294000.1 | Wheat | mitochondrion | 44.33 | 30.94 |
| TraesCS2B01G312500.1 | Wheat | mitochondrion | 44.33 | 30.94 |
| TraesCS2A01G296100.1 | Wheat | mitochondrion | 43.3 | 30.22 |
| KRH67959 | Soybean | mitochondrion | 40.21 | 30.0 |
| EES10764 | Sorghum | mitochondrion | 40.21 | 28.89 |
| GSMUA_Achr6P35640_001 | Banana | nucleus | 41.24 | 28.78 |
| Bra000516.1-P | Field mustard | mitochondrion | 37.11 | 26.87 |
| CDX83260 | Canola | mitochondrion | 37.11 | 26.87 |
| KRG95817 | Soybean | mitochondrion | 38.14 | 26.62 |
| CDY31170 | Canola | mitochondrion, nucleus | 36.08 | 26.52 |
| KRH67547 | Soybean | mitochondrion | 36.08 | 25.18 |
| KRH29453 | Soybean | nucleus | 31.96 | 22.14 |
| KRH25927 | Soybean | mitochondrion, plastid | 32.99 | 22.07 |
| KRH29452 | Soybean | nucleus | 34.02 | 21.15 |
| KRH55574 | Soybean | mitochondrion, plastid | 30.93 | 20.69 |
| KRG97345 | Soybean | mitochondrion | 28.87 | 19.86 |
| KRH09475 | Soybean | plastid | 36.08 | 19.44 |
| KRH17905 | Soybean | cytosol, mitochondrion, nucleus | 16.49 | 19.28 |
| KRH29451 | Soybean | nucleus | 32.99 | 18.71 |
| KRH50325 | Soybean | vacuole | 25.77 | 17.86 |
| KRH29454 | Soybean | nucleus | 30.93 | 17.65 |
| KRH31570 | Soybean | mitochondrion | 25.77 | 17.24 |
| KRH24829 | Soybean | mitochondrion | 25.77 | 17.12 |
| KRH51528 | Soybean | nucleus | 30.93 | 16.48 |
| KRH60842 | Soybean | mitochondrion | 30.93 | 16.22 |
| KRH24832 | Soybean | endoplasmic reticulum | 22.68 | 15.6 |
| KRH42209 | Soybean | endoplasmic reticulum | 27.84 | 15.34 |
| KRH38934 | Soybean | plastid | 23.71 | 14.94 |
| KRH58335 | Soybean | nucleus | 27.84 | 12.98 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 31.96 | 12.7 |
| KRH45033 | Soybean | nucleus, plastid | 31.96 | 12.65 |
| KRH56813 | Soybean | mitochondrion | 35.05 | 12.41 |
| KRH03133 | Soybean | nucleus | 34.02 | 12.0 |
| KRH40931 | Soybean | mitochondrion | 24.74 | 10.39 |
| KRG90774 | Soybean | nucleus | 23.71 | 8.24 |
| KRG92035 | Soybean | plastid | 32.99 | 8.21 |
| KRH35987 | Soybean | nucleus | 18.56 | 6.23 |
| KRH54698 | Soybean | plastid | 27.84 | 4.01 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.2 | EMBL:ACUP02006733 | EnsemblPlantsGene:GLYMA_11G010600 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K7LMF4 | EnsemblPlants:KRH27720 |
| ProteinID:KRH27720 | ProteinID:KRH27720.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR45502 |
| PANTHER:PTHR45502:SF2 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0002953284 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:743059..745712
Molecular Weight (calculated)
10742.0 Da
IEP (calculated)
9.620
GRAVY (calculated)
-0.147
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKKRGWICS QSFFSFHASC CFHLSPIGLA FSTTEEELAK AFSQYGSVLN ANIILNKTKN RSKGFGYATS AKEEEACKAQ IGMNGKILHG RVIYVDV
001: MLTQFLYRSF TPLLFSRSFS STLFVKGISF SSTEETLTQA FSQYGQVLKV DVIMDKIRCR PKGFAYVTFS SKEEAEKALL ELNAQLVDGR VVILDTTKAA
101: KHNPPDTKPN HAGGDS
101: KHNPPDTKPN HAGGDS
Arabidopsis Description
At2g27330 [Source:UniProtKB/TrEMBL;Acc:Q1ECN0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.