Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra010693.1-P | Field mustard | nucleus | 88.61 | 84.85 |
CDX90323 | Canola | plastid | 88.61 | 84.85 |
CDY41969 | Canola | cytosol | 68.35 | 84.38 |
CDY42616 | Canola | cytosol | 79.75 | 80.25 |
Solyc10g051390.1.1 | Tomato | nucleus | 55.7 | 74.58 |
AT4G39260.1 | Thale cress | nucleus | 79.75 | 74.56 |
Solyc10g051380.1.1 | Tomato | nucleus | 58.23 | 70.77 |
CDY46213 | Canola | nucleus | 53.8 | 69.67 |
CDY15876 | Canola | nucleus | 74.05 | 69.23 |
CDY70933 | Canola | nucleus | 73.42 | 69.05 |
CDY59763 | Canola | nucleus | 72.78 | 68.86 |
CDY72366 | Canola | nucleus | 73.42 | 67.84 |
GSMUA_Achr7P27650_001 | Banana | nucleus | 55.06 | 65.41 |
TraesCS5B01G013200.1 | Wheat | nucleus | 67.72 | 64.07 |
KRH29452 | Soybean | nucleus | 62.66 | 63.46 |
GSMUA_Achr8P05200_001 | Banana | cytosol | 62.03 | 63.23 |
KRH29451 | Soybean | nucleus | 67.72 | 62.57 |
VIT_03s0063g02610.t01 | Wine grape | nucleus | 63.92 | 62.35 |
CDX71276 | Canola | nucleus | 67.72 | 62.21 |
PGSC0003DMT400083014 | Potato | nucleus | 65.19 | 62.05 |
PGSC0003DMT400084258 | Potato | nucleus | 65.19 | 62.05 |
PGSC0003DMT400084290 | Potato | nucleus | 65.19 | 62.05 |
TraesCS5A01G015000.1 | Wheat | nucleus | 66.46 | 61.76 |
Solyc01g109660.2.1 | Tomato | extracellular | 68.35 | 61.71 |
PGSC0003DMT400001879 | Potato | cytosol | 67.72 | 60.8 |
Zm00001d041246_P001 | Maize | nucleus | 55.7 | 60.69 |
GSMUA_Achr3P30570_001 | Banana | plasma membrane | 65.19 | 60.59 |
Os12t0632000-01 | Rice | nucleus | 62.03 | 60.49 |
Zm00001d013568_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 60.76 | 60.38 |
GSMUA_Achr4P14550_001 | Banana | nucleus | 60.13 | 60.13 |
TraesCS5D01G020900.1 | Wheat | plastid | 65.82 | 59.77 |
Zm00001d031168_P001 | Maize | plastid | 58.23 | 59.35 |
KXG37870 | Sorghum | nucleus | 63.29 | 58.82 |
KRH51528 | Soybean | nucleus | 67.72 | 58.79 |
KRH29453 | Soybean | nucleus | 51.9 | 58.57 |
PGSC0003DMT400084266 | Potato | extracellular | 59.49 | 58.39 |
TraesCS4B01G020300.1 | Wheat | extracellular | 60.13 | 58.28 |
EES16438 | Sorghum | nucleus | 60.76 | 58.18 |
TraesCS6D01G199100.1 | Wheat | nucleus | 56.96 | 58.06 |
TraesCS6A01G216500.1 | Wheat | nucleus | 59.49 | 58.02 |
TraesCS4A01G293000.1 | Wheat | plastid | 59.49 | 58.02 |
TraesCS6B01G246400.1 | Wheat | nucleus | 59.49 | 58.02 |
HORVU6Hr1G055440.1 | Barley | nucleus | 58.86 | 57.41 |
TraesCS4D01G018500.1 | Wheat | nucleus | 59.49 | 56.63 |
KRH29454 | Soybean | nucleus | 59.49 | 55.29 |
HORVU5Hr1G002150.1 | Barley | nucleus | 59.49 | 54.34 |
KRH60842 | Soybean | mitochondrion | 63.29 | 54.05 |
Os03t0670700-01 | Rice | nucleus | 58.23 | 46.94 |
HORVU5Hr1G089190.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 27.85 | 44.44 |
CDY53035 | Canola | mitochondrion | 41.77 | 43.71 |
CDY47314 | Canola | mitochondrion | 41.14 | 43.33 |
CDY47311 | Canola | mitochondrion | 38.61 | 42.36 |
CDY06468 | Canola | mitochondrion | 38.61 | 41.22 |
CDY08312 | Canola | mitochondrion | 39.24 | 40.52 |
CDY26743 | Canola | mitochondrion | 32.28 | 34.46 |
CDY19230 | Canola | mitochondrion | 29.11 | 33.09 |
CDX82164 | Canola | mitochondrion | 29.75 | 32.41 |
CDY51614 | Canola | mitochondrion | 28.48 | 31.03 |
CDX82066 | Canola | cytosol, nucleus, plastid | 17.72 | 29.17 |
CDY09244 | Canola | mitochondrion | 18.99 | 28.85 |
CDY52166 | Canola | nucleus | 44.3 | 28.81 |
CDY48990 | Canola | nucleus | 44.3 | 28.81 |
CDY31588 | Canola | nucleus | 13.92 | 28.21 |
CDX83617 | Canola | nucleus | 41.14 | 28.02 |
CDY13632 | Canola | nucleus | 41.77 | 27.62 |
CDX74955 | Canola | plastid | 24.05 | 26.21 |
CDX91368 | Canola | plastid | 24.05 | 26.21 |
CDX73070 | Canola | mitochondrion | 43.67 | 25.56 |
CDY16825 | Canola | plastid | 42.41 | 25.48 |
CDY14089 | Canola | mitochondrion | 23.42 | 25.34 |
CDY04982 | Canola | mitochondrion | 23.42 | 25.34 |
CDX96526 | Canola | mitochondrion | 44.3 | 25.18 |
CDY28003 | Canola | plastid | 22.78 | 25.0 |
CDY49123 | Canola | mitochondrion | 41.77 | 24.81 |
CDY42426 | Canola | mitochondrion | 37.97 | 24.79 |
CDY35978 | Canola | mitochondrion, plastid | 20.89 | 23.08 |
CDY43035 | Canola | plastid | 21.52 | 22.22 |
CDY64931 | Canola | plastid | 21.52 | 22.22 |
CDY42466 | Canola | plastid | 21.52 | 22.22 |
CDY43820 | Canola | plastid | 21.52 | 21.66 |
CDX87197 | Canola | plastid | 44.3 | 21.28 |
CDY11283 | Canola | nucleus | 39.87 | 20.59 |
CDY02175 | Canola | mitochondrion | 42.41 | 19.76 |
CDY31170 | Canola | mitochondrion, nucleus | 15.82 | 18.94 |
CDX83260 | Canola | mitochondrion | 15.82 | 18.66 |
CDY65478 | Canola | endoplasmic reticulum | 23.42 | 17.79 |
CDY34132 | Canola | nucleus | 28.48 | 17.65 |
CDX80910 | Canola | nucleus | 28.48 | 17.24 |
CDX71070 | Canola | mitochondrion | 15.82 | 16.45 |
CDY19589 | Canola | plastid | 18.99 | 8.04 |
CDY06395 | Canola | nucleus | 18.35 | 7.29 |
Protein Annotations
MapMan:16.7.2 | Gene3D:3.30.70.330 | GO:A0A078FJ41 | UniProt:A0A078FJ41 | EnsemblPlants:CDY12133 | ProteinID:CDY12133 |
ProteinID:CDY12133.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00061124001 |
InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR45429 |
InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EE7B20 | SEG:seg |
Description
BnaC03g60490DBnaC03g60490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ41]
Coordinates
chrLK032017:-:758284..760373
Molecular Weight (calculated)
15823.1 Da
IEP (calculated)
4.944
GRAVY (calculated)
-0.625
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKILGLGYI IWSGETEYRC FVGGLAWATA DADLERTFSQ FGEVIDSKII NDRETGRSRG FGFVTFKDDK SMRDAIEEMN GKELDGRTIT VNEAQSRGGG
101: GGGRGGGGGY NRGGGGGGYG GGGGYGGGGG GYGRRDGGGY GGGDGGYGGN SGGGGGGW
101: GGGRGGGGGY NRGGGGGGYG GGGGYGGGGG GYGRRDGGGY GGGDGGYGGN SGGGGGGW
1: MSEVEYRCFV GGLAWATNDE DLQRTFSQFG DVIDSKIIND RESGRSRGFG FVTFKDEKAM RDAIEEMNGK ELDGRVITVN EAQSRGSGGG GW
Arabidopsis Description
RBG8Glycine-rich RNA-binding protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q03251]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.