Factsheet for Bra037056.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06468	Canola	mitochondrion	97.33	98.65
CDY08312	Canola	mitochondrion	100.0	98.04
Bra013997.1-P	Field mustard	mitochondrion	84.0	86.9
AT4G13850.1	Thale cress	mitochondrion	80.0	75.95
Solyc09g092320.2.1	Tomato	mitochondrion, nucleus	49.33	63.79
PGSC0003DMT400040748	Potato	mitochondrion	59.33	61.38
Solyc05g053780.2.1	Tomato	mitochondrion	64.0	59.63
Bra014000.1-P	Field mustard	mitochondrion	88.0	59.46
KRG97345	Soybean	mitochondrion	55.33	58.87
VIT_05s0029g00440.t01	Wine grape	mitochondrion, nucleus, plastid	59.33	58.55
PGSC0003DMT400053017	Potato	mitochondrion, plastid	58.0	57.24
GSMUA_Achr7P02750_001	Banana	mitochondrion	56.0	56.0
GSMUA_Achr4P16080_001	Banana	mitochondrion	61.33	48.42
KRH31570	Soybean	mitochondrion	44.0	45.52
Bra030284.1-P	Field mustard	nucleus	48.0	42.86
Bra010693.1-P	Field mustard	nucleus	45.33	41.21
Bra031210.1-P	Field mustard	nucleus	46.0	41.07
Bra001972.1-P	Field mustard	nucleus	44.67	40.85
Bra011869.1-P	Field mustard	cytosol	44.0	40.74
Bra025674.1-P	Field mustard	mitochondrion	38.67	40.0
Bra002976.1-P	Field mustard	mitochondrion	26.67	38.46
Bra020279.1-P	Field mustard	mitochondrion	26.0	35.45
Bra005189.1-P	Field mustard	plastid	33.33	34.72
Bra029692.1-P	Field mustard	mitochondrion	30.67	32.17
Bra008142.1-P	Field mustard	mitochondrion	54.67	31.06
Bra028739.1-P	Field mustard	mitochondrion	29.33	30.14
Bra015926.1-P	Field mustard	mitochondrion	55.33	29.12
Bra029020.1-P	Field mustard	plastid	29.33	28.76
Bra035944.1-P	Field mustard	plastid	49.33	28.14
Bra008020.1-P	Field mustard	endoplasmic reticulum	38.0	27.4
Bra008100.1-P	Field mustard	cytosol	14.0	25.61
Bra012986.1-P	Field mustard	mitochondrion	52.0	25.57
Bra025205.1-P	Field mustard	nucleus	34.67	22.41
Bra000516.1-P	Field mustard	mitochondrion	20.0	22.39
Bra032933.1-P	Field mustard	nucleus	35.33	21.81
Bra005798.1-P	Field mustard	nucleus	32.67	16.01
Bra003841.1-P	Field mustard	cytosol, nucleus, plastid	22.67	13.23
Bra031244.1-P	Field mustard	plastid	30.0	12.06

Protein Annotations

EnsemblPlants:Bra037056.1	EnsemblPlants:Bra037056.1-P	EnsemblPlantsGene:Bra037056	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf
InterPro:RRM_dom	PANTHER:PTHR44202	PFAM:PF00076	PFscan:PS50102	SEG:seg	SMART:SM00360
SUPFAM:SSF54928	UniParc:UPI00025474FD	UniProt:M4F7J5	MapMan:16.7.2	MapMan:16.12.5.2	:

Description

AT4G13850 (E=1e-049) ATGRP2 | GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA binding / single-stranded DNA binding

Coordinates

chrA05:+:9625301..9626031

Molecular Weight (calculated)

15264.8 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.279

Length

150 amino acids

Sequence
(BLAST)

001: MAFCKSLGGL LRQGVVSQTG NIPVTSVLGS LRYMSTKLFV GGLSWGTDDQ SLREAFANFG EVVDAKVIVD RETGRSRGFG FVNFTDETAA NTAISEMDGK
101: DLNGRSIRVN VANERPSTPR YGGGGGYGGG GGGGYGGGSY GAGGGDGGGY

Best Arabidopsis Sequence Match ( AT4G13850.1 )
(BLAST)

001: MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSGG GGGYGGGGGG YGGGGGGYGG GGDGGGGF

Arabidopsis Description

RBG2Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.