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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400038307 Potato cytosol 15.21 65.06
Solyc07g025200.1.1 Tomato cytosol 26.2 60.0
Solyc07g025230.1.1 Tomato cytosol 26.2 60.0
GSMUA_Achr2P23090_001 Banana cytosol 18.87 58.01
PGSC0003DMT400013736 Potato cytosol 49.3 55.56
GSMUA_AchrUn_... Banana cytosol 13.1 53.45
VIT_18s0001g12630.t01 Wine grape mitochondrion 53.66 52.92
TraesCS6B01G249200.1 Wheat mitochondrion 47.04 49.85
Os02t0611400-01 Rice mitochondrion 47.75 49.63
TraesCS6A01G219800.1 Wheat mitochondrion 46.62 49.4
TraesCS6D01G202700.1 Wheat mitochondrion 46.34 49.1
HORVU6Hr1G056180.2 Barley mitochondrion 45.92 48.37
EES05410 Sorghum mitochondrion 46.34 48.24
KRH05834 Soybean mitochondrion 47.04 48.2
KRH15184 Soybean mitochondrion 46.76 48.05
Zm00001d017185_P001 Maize mitochondrion 44.79 47.25
CDY39372 Canola mitochondrion 42.82 44.25
Bra025746.1-P Field mustard mitochondrion 43.1 42.62
CDY29423 Canola mitochondrion 42.96 42.48
AT1G19520.1 Thale cress mitochondrion 43.24 42.34
Solyc07g025210.1.1 Tomato plastid 20.0 37.77
GSMUA_Achr11P... Banana cytosol 18.17 36.86
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr3G14510_001EnsemblPlants:GSMUA_Achr3P14510_001EnsemblPlants:GSMUA_Achr3T14510_001InterPro:IPR002885InterPro:IPR011990UniProt:M0SEL8
PFAM:PF01535PFAM:PF13812PFAM:PF17177InterPro:PPR_longPFscan:PS51375PANTHER:PTHR24015
PANTHER:PTHR24015:SF515InterPro:Pentatricopeptide_repeatSUPFAM:SSF48452TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI000295977E
SEG:seg:::::
Description
Putative Pentatricopeptide repeat-containing protein At1g19525 [Source:GMGC_GENE;Acc:GSMUA_Achr3G14510_001]
Coordinates
chr3:+:13899751..13914342
Molecular Weight (calculated)
80326.3 Da
IEP (calculated)
7.343
GRAVY (calculated)
-0.411
Length
710 amino acids
Sequence
(BLAST)
001: MRSFLLSRLR RNPRFFLSPI ASISTPQSPS PPPPLSSPSI RTLHGLPPNP QSVITAQPSS SRVVQLFSPE ETHTDGCDDE DGPMNEFLSR FVWIIRPKLA
101: DAYPALPKDT LEAMLLVVCQ KVVALMEPGA SVDDPPVDLS EDLWKTVVEV SNSVYEAMRR DRMREELKKY LHWDEVKEMC RFAGDIGIQG PMLRELRFKW
201: AREKLADVEF YRKLNQMREQ AQNQERQKVL SLSSGTDAGS VSLAEEKVGG SKVAALPQRK GKIKYKIYGL DLSDPKWAEV AEKVEEAEKH FVPEELQPVE
301: GKCKKVDERI LSLKAKRDDP APLLAEWKEL LQPKRIDWLA LLDRIKQRNV DLYLKVAELL LSEESFETNI RDYSKLIDAH SKADHMEDAE RILEVMTGRG
401: IMPDILTFLI LVHMYSKAGD LDRAKDAFES LRKEGFQPDL KVYNSMITAY VKAGLPKQGE MLVREMESRD IKPTKEIYME LLRAFTKLGQ VDGAQRIMNT
501: MQFAGIQPTL ESFTLLVEAY GQSGDPDQAR GHFDHMIRSG HKPDDRCTAS MMAAYVKKNL LDKALDLLLT LEKDGFQPGI ATYSILVDWL GRLQLVDEAE
601: GLLSKLAEKG EAPFEIHVSL CDMYSRAHQL EKARKSLKIL EARSKLLRAD QLERIISGLL AGGLLEDAKR IYDCMQSQGL APSEPIRVAL LAAQSIRRQK
701: SPTRRGGKSR
Best Arabidopsis Sequence Match ( AT1G19520.1 )
(BLAST)
001: MKSFLLSRQA IHRISLLSSK TPTFCRNFSA ITSTISHSDR HLRSYDEQTP FQNVEIPRPI SSFNRYFHFT RESRLSESSA AIDDSNDQEE DDEDGTTNEF
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS
Arabidopsis Description
NFD5pentatricopeptide (PPR) repeat-containing protein [Source:TAIR;Acc:AT1G19520]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.