Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400038307 | Potato | cytosol | 15.21 | 65.06 |
Solyc07g025200.1.1 | Tomato | cytosol | 26.2 | 60.0 |
Solyc07g025230.1.1 | Tomato | cytosol | 26.2 | 60.0 |
GSMUA_Achr2P23090_001 | Banana | cytosol | 18.87 | 58.01 |
PGSC0003DMT400013736 | Potato | cytosol | 49.3 | 55.56 |
GSMUA_AchrUn_... | Banana | cytosol | 13.1 | 53.45 |
VIT_18s0001g12630.t01 | Wine grape | mitochondrion | 53.66 | 52.92 |
TraesCS6B01G249200.1 | Wheat | mitochondrion | 47.04 | 49.85 |
Os02t0611400-01 | Rice | mitochondrion | 47.75 | 49.63 |
TraesCS6A01G219800.1 | Wheat | mitochondrion | 46.62 | 49.4 |
TraesCS6D01G202700.1 | Wheat | mitochondrion | 46.34 | 49.1 |
HORVU6Hr1G056180.2 | Barley | mitochondrion | 45.92 | 48.37 |
EES05410 | Sorghum | mitochondrion | 46.34 | 48.24 |
KRH05834 | Soybean | mitochondrion | 47.04 | 48.2 |
KRH15184 | Soybean | mitochondrion | 46.76 | 48.05 |
Zm00001d017185_P001 | Maize | mitochondrion | 44.79 | 47.25 |
CDY39372 | Canola | mitochondrion | 42.82 | 44.25 |
Bra025746.1-P | Field mustard | mitochondrion | 43.1 | 42.62 |
CDY29423 | Canola | mitochondrion | 42.96 | 42.48 |
AT1G19520.1 | Thale cress | mitochondrion | 43.24 | 42.34 |
Solyc07g025210.1.1 | Tomato | plastid | 20.0 | 37.77 |
GSMUA_Achr11P... | Banana | cytosol | 18.17 | 36.86 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
EnsemblPlantsGene:GSMUA_Achr3G14510_001 | EnsemblPlants:GSMUA_Achr3P14510_001 | EnsemblPlants:GSMUA_Achr3T14510_001 | InterPro:IPR002885 | InterPro:IPR011990 | UniProt:M0SEL8 |
PFAM:PF01535 | PFAM:PF13812 | PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 |
PANTHER:PTHR24015:SF515 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000295977E |
SEG:seg | : | : | : | : | : |
Description
Putative Pentatricopeptide repeat-containing protein At1g19525 [Source:GMGC_GENE;Acc:GSMUA_Achr3G14510_001]
Coordinates
chr3:+:13899751..13914342
Molecular Weight (calculated)
80326.3 Da
IEP (calculated)
7.343
GRAVY (calculated)
-0.411
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSFLLSRLR RNPRFFLSPI ASISTPQSPS PPPPLSSPSI RTLHGLPPNP QSVITAQPSS SRVVQLFSPE ETHTDGCDDE DGPMNEFLSR FVWIIRPKLA
101: DAYPALPKDT LEAMLLVVCQ KVVALMEPGA SVDDPPVDLS EDLWKTVVEV SNSVYEAMRR DRMREELKKY LHWDEVKEMC RFAGDIGIQG PMLRELRFKW
201: AREKLADVEF YRKLNQMREQ AQNQERQKVL SLSSGTDAGS VSLAEEKVGG SKVAALPQRK GKIKYKIYGL DLSDPKWAEV AEKVEEAEKH FVPEELQPVE
301: GKCKKVDERI LSLKAKRDDP APLLAEWKEL LQPKRIDWLA LLDRIKQRNV DLYLKVAELL LSEESFETNI RDYSKLIDAH SKADHMEDAE RILEVMTGRG
401: IMPDILTFLI LVHMYSKAGD LDRAKDAFES LRKEGFQPDL KVYNSMITAY VKAGLPKQGE MLVREMESRD IKPTKEIYME LLRAFTKLGQ VDGAQRIMNT
501: MQFAGIQPTL ESFTLLVEAY GQSGDPDQAR GHFDHMIRSG HKPDDRCTAS MMAAYVKKNL LDKALDLLLT LEKDGFQPGI ATYSILVDWL GRLQLVDEAE
601: GLLSKLAEKG EAPFEIHVSL CDMYSRAHQL EKARKSLKIL EARSKLLRAD QLERIISGLL AGGLLEDAKR IYDCMQSQGL APSEPIRVAL LAAQSIRRQK
701: SPTRRGGKSR
101: DAYPALPKDT LEAMLLVVCQ KVVALMEPGA SVDDPPVDLS EDLWKTVVEV SNSVYEAMRR DRMREELKKY LHWDEVKEMC RFAGDIGIQG PMLRELRFKW
201: AREKLADVEF YRKLNQMREQ AQNQERQKVL SLSSGTDAGS VSLAEEKVGG SKVAALPQRK GKIKYKIYGL DLSDPKWAEV AEKVEEAEKH FVPEELQPVE
301: GKCKKVDERI LSLKAKRDDP APLLAEWKEL LQPKRIDWLA LLDRIKQRNV DLYLKVAELL LSEESFETNI RDYSKLIDAH SKADHMEDAE RILEVMTGRG
401: IMPDILTFLI LVHMYSKAGD LDRAKDAFES LRKEGFQPDL KVYNSMITAY VKAGLPKQGE MLVREMESRD IKPTKEIYME LLRAFTKLGQ VDGAQRIMNT
501: MQFAGIQPTL ESFTLLVEAY GQSGDPDQAR GHFDHMIRSG HKPDDRCTAS MMAAYVKKNL LDKALDLLLT LEKDGFQPGI ATYSILVDWL GRLQLVDEAE
601: GLLSKLAEKG EAPFEIHVSL CDMYSRAHQL EKARKSLKIL EARSKLLRAD QLERIISGLL AGGLLEDAKR IYDCMQSQGL APSEPIRVAL LAAQSIRRQK
701: SPTRRGGKSR
001: MKSFLLSRQA IHRISLLSSK TPTFCRNFSA ITSTISHSDR HLRSYDEQTP FQNVEIPRPI SSFNRYFHFT RESRLSESSA AIDDSNDQEE DDEDGTTNEF
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS
Arabidopsis Description
NFD5pentatricopeptide (PPR) repeat-containing protein [Source:TAIR;Acc:AT1G19520]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.