Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29423 | Canola | mitochondrion | 98.89 | 98.89 |
| AT1G19520.1 | Thale cress | mitochondrion | 76.46 | 75.72 |
| PGSC0003DMT400038307 | Potato | cytosol | 13.37 | 57.83 |
| PGSC0003DMT400013736 | Potato | cytosol | 48.75 | 55.56 |
| Solyc07g025230.1.1 | Tomato | cytosol | 23.96 | 55.48 |
| Solyc07g025200.1.1 | Tomato | cytosol | 23.68 | 54.84 |
| VIT_18s0001g12630.t01 | Wine grape | mitochondrion | 51.95 | 51.81 |
| KRH05834 | Soybean | mitochondrion | 48.89 | 50.65 |
| KRH15184 | Soybean | mitochondrion | 48.61 | 50.51 |
| GSMUA_Achr3P14510_001 | Banana | mitochondrion | 42.62 | 43.1 |
| Solyc07g025210.1.1 | Tomato | plastid | 22.42 | 42.82 |
| TraesCS6A01G219800.1 | Wheat | mitochondrion | 39.55 | 42.39 |
| TraesCS6D01G202700.1 | Wheat | mitochondrion | 39.41 | 42.24 |
| TraesCS6B01G249200.1 | Wheat | mitochondrion | 39.41 | 42.24 |
| Os02t0611400-01 | Rice | mitochondrion | 39.14 | 41.14 |
| HORVU6Hr1G056180.2 | Barley | mitochondrion | 38.44 | 40.95 |
| EES05410 | Sorghum | mitochondrion | 37.6 | 39.59 |
| Zm00001d017185_P001 | Maize | mitochondrion | 36.49 | 38.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.36 | 34.48 |
| GSMUA_Achr2P23090_001 | Banana | cytosol | 11.0 | 34.2 |
| Bra033224.1-P | Field mustard | plastid | 18.11 | 32.26 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EnsemblPlantsGene:Bra025746 | EnsemblPlants:Bra025746.1 | EnsemblPlants:Bra025746.1-P | GO:GO:0000741 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010197 | GO:GO:0016043 | GO:GO:0030154 | InterPro:IPR002885 | InterPro:IPR011990 | UniProt:M4EAD8 |
| PFAM:PF13812 | PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF515 |
| InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000253EE7C | SEG:seg | : |
Description
AT1G19520 (E=2e-300) NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5)
Coordinates
chrA06:+:7679352..7681781
Molecular Weight (calculated)
81480.2 Da
IEP (calculated)
5.338
GRAVY (calculated)
-0.519
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLLLSRQA IRRISLSSPK TPPFFRNFSA AAPSISRSDR HLRSYDEPIP RPVSSSFTRH FHSTLESRLS DSTASSQIHE EEEDDGTTNE FLSRFVWIMR
101: GKVSEAFPDS DKKMVDGMLL LIVEKVVAEI ERGGFSKVGG SSSSAPPPSP LSEFSDDLWA TIWEVSNTVL KDMEKERKKE KMKVYVQSPE VMEMCRFAGE
201: IGIRGDLLRE LRFTWAREKM EEAEFNESLE QMRDLDSSIR ESETVDADEE GEESVVDSDE AQPRSISLPK RKGKFKYKIY GLELSDPKWG EVADKIHEAE
301: EEADWREAKP VTGKCKLVME KLESLEEKDD PSGLIAEWVE LLEPQRVDWI ALLDQLRDAN TNAYLKVAEH VLDDKSFRAS ISDYSKLIHI HAKENHTEAV
401: ERILKKMSQN GIFPDISIAT ALIHLYSKSG NLERATEAFE SLKSYGLRPD NKIYTSMIMG YVNAGKPKLG ERLMRDMDAR DMKCSDEVYM AMLRAFAQTG
501: DADGAAGIFN SMQLDFKDTN CFEAYGLLVE AYGRAGKADK AKINFDQMRT RGFKPDDKCI ANMIRAYKRE NSLDKALRLL LQLEKDGIEI GVITYTVLVD
601: WMATLGLIEE AEQLLVKISQ LGEAPPFELQ VSLCYMYSTA RNEKKTLQAL GVLEAKRDQM GPNEFERVIT GLKTGGFEKD ARRMFKHMEA RKFLPSDRLK
701: IDMGASPSFG SGFNRVRR
101: GKVSEAFPDS DKKMVDGMLL LIVEKVVAEI ERGGFSKVGG SSSSAPPPSP LSEFSDDLWA TIWEVSNTVL KDMEKERKKE KMKVYVQSPE VMEMCRFAGE
201: IGIRGDLLRE LRFTWAREKM EEAEFNESLE QMRDLDSSIR ESETVDADEE GEESVVDSDE AQPRSISLPK RKGKFKYKIY GLELSDPKWG EVADKIHEAE
301: EEADWREAKP VTGKCKLVME KLESLEEKDD PSGLIAEWVE LLEPQRVDWI ALLDQLRDAN TNAYLKVAEH VLDDKSFRAS ISDYSKLIHI HAKENHTEAV
401: ERILKKMSQN GIFPDISIAT ALIHLYSKSG NLERATEAFE SLKSYGLRPD NKIYTSMIMG YVNAGKPKLG ERLMRDMDAR DMKCSDEVYM AMLRAFAQTG
501: DADGAAGIFN SMQLDFKDTN CFEAYGLLVE AYGRAGKADK AKINFDQMRT RGFKPDDKCI ANMIRAYKRE NSLDKALRLL LQLEKDGIEI GVITYTVLVD
601: WMATLGLIEE AEQLLVKISQ LGEAPPFELQ VSLCYMYSTA RNEKKTLQAL GVLEAKRDQM GPNEFERVIT GLKTGGFEKD ARRMFKHMEA RKFLPSDRLK
701: IDMGASPSFG SGFNRVRR
001: MKSFLLSRQA IHRISLLSSK TPTFCRNFSA ITSTISHSDR HLRSYDEQTP FQNVEIPRPI SSFNRYFHFT RESRLSESSA AIDDSNDQEE DDEDGTTNEF
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS
Arabidopsis Description
NFD5pentatricopeptide (PPR) repeat-containing protein [Source:TAIR;Acc:AT1G19520]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.