Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G219800.1 | Wheat | mitochondrion | 98.21 | 98.21 |
| TraesCS6D01G202700.1 | Wheat | mitochondrion | 97.31 | 97.31 |
| HORVU6Hr1G056180.2 | Barley | mitochondrion | 92.54 | 91.99 |
| Os02t0611400-01 | Rice | mitochondrion | 70.0 | 68.67 |
| EES05410 | Sorghum | mitochondrion | 68.66 | 67.45 |
| Zm00001d017185_P001 | Maize | mitochondrion | 65.97 | 65.68 |
| PGSC0003DMT400038307 | Potato | cytosol | 12.69 | 51.2 |
| GSMUA_Achr3P14510_001 | Banana | mitochondrion | 49.85 | 47.04 |
| Solyc07g025230.1.1 | Tomato | cytosol | 21.49 | 46.45 |
| Solyc07g025200.1.1 | Tomato | cytosol | 21.34 | 46.13 |
| GSMUA_Achr2P23090_001 | Banana | cytosol | 15.22 | 44.16 |
| PGSC0003DMT400013736 | Potato | cytosol | 40.45 | 43.02 |
| CDY39372 | Canola | mitochondrion | 41.49 | 40.47 |
| KRH05834 | Soybean | mitochondrion | 41.49 | 40.12 |
| KRH15184 | Soybean | mitochondrion | 41.34 | 40.09 |
| VIT_18s0001g12630.t01 | Wine grape | mitochondrion | 42.39 | 39.44 |
| Bra025746.1-P | Field mustard | mitochondrion | 42.24 | 39.41 |
| CDY29423 | Canola | mitochondrion | 42.09 | 39.28 |
| AT1G19520.1 | Thale cress | mitochondrion | 40.9 | 37.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 9.7 | 37.36 |
| Solyc07g025210.1.1 | Tomato | plastid | 17.16 | 30.59 |
| TraesCS2B01G147800.1 | Wheat | plastid | 17.01 | 24.1 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G249200.1 | EnsemblPlantsGene:TraesCS6B01G249200 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:PPR_long | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | ncoils:Coil |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF515 | PFAM:PF01535 | PFAM:PF13812 | PFAM:PF17177 | PFscan:PS51375 |
| SEG:seg | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:447109792..447113379
Molecular Weight (calculated)
75281.0 Da
IEP (calculated)
6.763
GRAVY (calculated)
-0.386
Length
670 amino acids
Sequence
(BLAST)
(BLAST)
001: MRALLSLSKL ARRLPTSLAA TRVAPPLLQR HLHADSALPP QAPPPFASRI LQSEESPDPS TDLEHAQPAP DPVLDEFLAR LVTALRPTLA AAFPTHTRPV
101: LDEMLRLIAE AVLNRLSGAD PGPDTVELSD DLWAAVWEVS ASVREAMRRD QVRADLRNYL HSDDVKEMTR FAVDVGIRGA MLRELRFKWA REKLEEVEFY
201: RGLEVMRQQA DAADSPAAPP PARLTALPQR KGEVKFKISG LDLSDPKWAE VAERAAEAEA HFVPEEAKAV DGKAKKAEEQ LLATEPRKGN PVPAMEEWKE
301: ELRPKRVDWM ALLERVKARN VELYLKVAEI LLDEDSFAAT IRDYSKLIDL HSKATHVQDV ERILGKMKEK DIAPDILTSI TLVHMYSKSG NLEQATRAFD
401: FIQKEGLQPD TKLFTSMISA CINAGDPKQA EKLVRNMDEL SMKPNREIYM DVMRAYAERN LVDGAQSIKT KMSFAGIEPP LECFTLLIEA YGRAGNPDYA
501: YEAFEQMRKN GHEPDDRCLA GMITALMKKN QLDQALKLLL SLEKEGVKPG VKTNLVLLDW LSMLQLVQEA EQLVQKIRKA GEEPLEIHVY LADMYAKSRQ
601: EEKARKSLKI LEEKKRLLKA DQFERIIRGL LVGGFSEDAS KYFKMMRSRG FVPSATVEAG VRGVGRLAGR
101: LDEMLRLIAE AVLNRLSGAD PGPDTVELSD DLWAAVWEVS ASVREAMRRD QVRADLRNYL HSDDVKEMTR FAVDVGIRGA MLRELRFKWA REKLEEVEFY
201: RGLEVMRQQA DAADSPAAPP PARLTALPQR KGEVKFKISG LDLSDPKWAE VAERAAEAEA HFVPEEAKAV DGKAKKAEEQ LLATEPRKGN PVPAMEEWKE
301: ELRPKRVDWM ALLERVKARN VELYLKVAEI LLDEDSFAAT IRDYSKLIDL HSKATHVQDV ERILGKMKEK DIAPDILTSI TLVHMYSKSG NLEQATRAFD
401: FIQKEGLQPD TKLFTSMISA CINAGDPKQA EKLVRNMDEL SMKPNREIYM DVMRAYAERN LVDGAQSIKT KMSFAGIEPP LECFTLLIEA YGRAGNPDYA
501: YEAFEQMRKN GHEPDDRCLA GMITALMKKN QLDQALKLLL SLEKEGVKPG VKTNLVLLDW LSMLQLVQEA EQLVQKIRKA GEEPLEIHVY LADMYAKSRQ
601: EEKARKSLKI LEEKKRLLKA DQFERIIRGL LVGGFSEDAS KYFKMMRSRG FVPSATVEAG VRGVGRLAGR
001: MKSFLLSRQA IHRISLLSSK TPTFCRNFSA ITSTISHSDR HLRSYDEQTP FQNVEIPRPI SSFNRYFHFT RESRLSESSA AIDDSNDQEE DDEDGTTNEF
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS
Arabidopsis Description
NFD5pentatricopeptide (PPR) repeat-containing protein [Source:TAIR;Acc:AT1G19520]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.