Factsheet for GSMUA_AchrUn_randomP23320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P23090_001	Banana	cytosol	55.17	41.56
Solyc07g025210.1.1	Tomato	plastid	30.46	14.1
GSMUA_Achr3P14510_001	Banana	mitochondrion	53.45	13.1
EES05410	Sorghum	mitochondrion	40.8	10.41
Os02t0611400-01	Rice	mitochondrion	40.8	10.4
Zm00001d017185_P001	Maize	mitochondrion	37.93	9.81
TraesCS6A01G219800.1	Wheat	mitochondrion	37.36	9.7
TraesCS6B01G249200.1	Wheat	mitochondrion	37.36	9.7
TraesCS6D01G202700.1	Wheat	mitochondrion	37.36	9.7
HORVU6Hr1G056180.2	Barley	mitochondrion	37.36	9.64
VIT_18s0001g12630.t01	Wine grape	mitochondrion	39.66	9.58
PGSC0003DMT400013736	Potato	cytosol	34.48	9.52
KRH05834	Soybean	mitochondrion	35.06	8.8
KRH15184	Soybean	mitochondrion	33.91	8.54
CDY39372	Canola	mitochondrion	33.33	8.44
CDY29423	Canola	mitochondrion	34.48	8.36
Bra025746.1-P	Field mustard	mitochondrion	34.48	8.36
AT1G19520.1	Thale cress	mitochondrion	33.33	8.0
GSMUA_Achr11P...	Banana	cytosol	15.52	7.71
PGSC0003DMT400038307	Potato	cytosol	2.87	3.01
Solyc07g025200.1.1	Tomato	cytosol	3.45	1.94
Solyc07g025230.1.1	Tomato	cytosol	3.45	1.94

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP23320_001	EnsemblPlants:GSMUA_AchrUn_randomT23320_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG23320_001	ncoils:Coil	UniParc:UPI0002949497	UniProt:M0UBP0
MapMan:35.1	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23320_001]

Coordinates

chrchrUn_random:-:113947265..113950303

Molecular Weight (calculated)

19791.9 Da

IEP (calculated)

9.518

GRAVY (calculated)

-0.513

Length

174 amino acids

Sequence
(BLAST)

001: MREQAQKQED RQKGAFLNSP TDARSVSLAD EKGGASRVAA FPQRKGKFKY TIYGLDLSDP QMGGVGIKVA EAENHFVPQE LQPVEEKCKE IEERILSLKA
101: KRDDLPPLLA DWKEFLQPKR IDWLALLDRI KERNVDLYLK VIYGSYQVKG LGFQMSIAWA LYVFKAVSTK DATK

Best Arabidopsis Sequence Match ( AT1G19520.1 )
(BLAST)

001: MKSFLLSRQA IHRISLLSSK TPTFCRNFSA ITSTISHSDR HLRSYDEQTP FQNVEIPRPI SSFNRYFHFT RESRLSESSA AIDDSNDQEE DDEDGTTNEF
101: LSRFVWIMRG KVSEAYPDCD KKMIDGMLLL IVEKVVEEIE RGGFNKVGSA PPSPSSEFSD DLWATIWEVS NTVLKDMEKE RKKEKMKQYV QSPEVMEMCR
201: FAGEIGIRGD LLRELRFKWA REKMDDAEFY ESLEQQRDLD NSIRESETVD GEVEEEGFVP SDEVESRSIS LPKRKGKLKY KIYGLELSDP KWVEMADKIH
301: EAEEEADWRE PKPVTGKCKL VMEKLESLQE GDDPSGLLAE WAELLEPNRV DWIALINQLR EGNTHAYLKV AEGVLDEKSF NASISDYSKL IHIHAKENHI
401: EDVERILKKM SQNGIFPDIL TATALVHMYS KSGNFERATE AFENLKSYGL RPDEKIYEAM ILGYVNAGKP KLGERLMKEM QAKELKASEE VYMALLRAYA
501: QMGDANGAAG ISSSMQYASD GPLSFEAYSL FVEAYGKAGQ VDKAKSNFDE MRKLGHKPDD KCIANLVRAY KGENSLDKAL RLLLQLEKDG IEIGVITYTV
601: LVDWMANLGL IEEAEQLLVK ISQLGEAPPF ELQVSLCCMY SGVRNEKKTL QALGVLEAKR DQMGPNEFDK VISALKRGGF EKDARRMYKY MEARKFLPSQ
701: RLQMDMVAPP RAFGSGSGRV RRFNS

Arabidopsis Description

NFD5pentatricopeptide (PPR) repeat-containing protein [Source:TAIR;Acc:AT1G19520]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.