Factsheet for Zm00001d012561_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043175_P001	Maize	extracellular	76.12	75.56
KXG33568	Sorghum	extracellular	68.66	69.17
Bra008912.1-P	Field mustard	cytosol	41.79	55.45
Bra023365.1-P	Field mustard	cytosol	41.79	55.45
CDX69704	Canola	cytosol	41.79	55.45
CDX97171	Canola	cytosol	41.79	55.45
CDX85699	Canola	cytosol	41.04	54.46
CDX91170	Canola	cytosol	41.04	54.46
Zm00001d038558_P003	Maize	cytosol	43.28	52.73
AT5G12140.1	Thale cress	cytosol	39.55	52.48
Zm00001d010290_P001	Maize	extracellular	33.58	25.57
Zm00001d038173_P003	Maize	extracellular	31.34	24.28
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	41.79	22.86

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	EMBL:AM055631	ProteinID:AQK99874.1	ProteinID:AQK99876.1	ProteinID:BAA09666.1
InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414
MEROPS:I25.958	EMBL:LN650976	UniProt:P93627	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287
PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00000A06B5	EnsemblPlantsGene:Zm00001d012561	EnsemblPlants:Zm00001d012561_P001	EnsemblPlants:Zm00001d012561_T001	SEG:seg

Description

cystatin2Cystatin2%3B Cysteine proteinase inhibitor%3B Putative cystatin

Coordinates

chr8:-:176655420..176657307

Molecular Weight (calculated)

14882.9 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.281

Length

134 amino acids

Sequence
(BLAST)

001: MRKHRIVSLV AALLILLALA VSSTRNAQED SMADNTGTLA GGIKDVPGNE NDLHLQELAR FAVDEHNKKA NALLGFEKLV KAKTQVVAGT MYYLTIEVKD
101: GEVKKLYEAK VWEKPWENFK ELQEFKPVEE GASA

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.