Factsheet for Bra008912.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
peroxisome 1
mitochondrion 2
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69704	Canola	cytosol	99.01	99.01
Bra023365.1-P	Field mustard	cytosol	92.08	92.08
AT5G12140.1	Thale cress	cytosol	85.15	85.15
TraesCS1D01G310300.1	Wheat	plastid	51.49	48.6
TraesCS1B01G322100.1	Wheat	mitochondrion	50.49	47.66
HORVU1Hr1G067980.1	Barley	cytosol	50.49	47.66
Zm00001d038558_P003	Maize	cytosol	51.49	47.27
Bra016965.1-P	Field mustard	cytosol	42.57	46.24
Bra000210.1-P	Field mustard	cytosol, mitochondrion, plastid	39.6	42.55
Zm00001d012561_P001	Maize	extracellular	55.45	41.79
KXG33568	Sorghum	extracellular	54.46	41.35
Zm00001d043175_P001	Maize	extracellular	53.47	40.0
Os01t0803200-01	Rice	extracellular	50.49	36.43
TraesCS3D01G325100.1	Wheat	extracellular, unclear	49.51	35.21
HORVU3Hr1G078670.2	Barley	extracellular, nucleus	48.51	34.75
HORVU3Hr1G078680.1	Barley	cytosol	45.54	34.07
Os05t0494200-02	Rice	plastid	50.49	33.77
EES19739	Sorghum	mitochondrion	51.49	33.33
TraesCS5D01G502100.1	Wheat	cytosol	38.61	33.05
HORVU1Hr1G067870.1	Barley	plastid	50.49	32.9
TraesCS3A01G331500.1	Wheat	extracellular	44.55	31.69
TraesCS5D01G502600.1	Wheat	extracellular	41.58	29.58
TraesCS5A01G487700.1	Wheat	extracellular	40.59	28.87
TraesCS5D01G502200.1	Wheat	extracellular	39.6	27.78
Bra038725.1-P	Field mustard	cytosol	54.46	26.83
TraesCS5A01G487600.1	Wheat	extracellular	41.58	25.0
Bra034755.1-P	Field mustard	extracellular	54.46	24.66
KXG22254	Sorghum	cytosol, extracellular, mitochondrion, plastid	41.58	24.0
Bra005839.1-P	Field mustard	extracellular	39.6	17.47

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	ProteinID:AAQ03209	ProteinID:AAQ03209.1	EMBL:AF408862	EnsemblPlantsGene:Bra008912
EnsemblPlants:Bra008912.1	EnsemblPlants:Bra008912.1-P	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538
GO:GO:0030234	GO:GO:0030414	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413
PANTHER:PTHR11413:SF45	InterPro:Prot_inh_cystat_CS	UniProt:Q71QE1	SMART:SM00043	SUPFAM:SSF54403	UniParc:UPI00001BE54D

Description

AT5G12140 (E=1e-046) ATCYS1 | ATCYS1 (A. thaliana cystatin-1); cysteine-type endopeptidase inhibitor

Coordinates

chrA10:+:14383402..14383809

Molecular Weight (calculated)

11316.4 Da

IEP (calculated)

5.612

GRAVY (calculated)

-0.553

Length

101 amino acids

Sequence
(BLAST)

001: MADQQGGTVL GGVRDVDPNA NDLQVESLAR FAVDEHNKKE NVSLEYRRLI GAKTQVVAGT MHHLTVEVAD GETKKVYEAK VLEKAWENLK KLEDFTHLRD
101: V

Best Arabidopsis Sequence Match ( AT5G12140.1 )
(BLAST)

001: MADQQAGTIV GGVRDIDANA NDLQVESLAR FAVDEHNKNE NLTLEYKRLL GAKTQVVAGT MHHLTVEVAD GETNKVYEAK VLEKAWENLK QLESFNHLHD
101: V

Arabidopsis Description

CYS1Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178UCE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.