Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G325100.1 | Wheat | extracellular, unclear | 88.03 | 88.03 |
| HORVU3Hr1G078670.2 | Barley | extracellular, nucleus | 83.8 | 84.4 |
| HORVU3Hr1G078680.1 | Barley | cytosol | 46.48 | 48.89 |
| TraesCS5A01G487700.1 | Wheat | extracellular | 47.18 | 47.18 |
| Bra023365.1-P | Field mustard | cytosol | 32.39 | 45.54 |
| CDX85699 | Canola | cytosol | 32.39 | 45.54 |
| CDX91170 | Canola | cytosol | 32.39 | 45.54 |
| AT5G12140.1 | Thale cress | cytosol | 31.69 | 44.55 |
| Bra008912.1-P | Field mustard | cytosol | 31.69 | 44.55 |
| CDX97171 | Canola | cytosol | 31.69 | 44.55 |
| CDX69704 | Canola | cytosol | 30.99 | 43.56 |
| Os01t0803200-01 | Rice | extracellular | 41.55 | 42.14 |
| TraesCS5A01G487600.1 | Wheat | extracellular | 40.14 | 33.93 |
| TraesCS1A01G256400.1 | Wheat | extracellular | 28.17 | 22.1 |
| TraesCS3A01G185800.1 | Wheat | extracellular | 33.8 | 19.75 |
Protein Annotations
| Gene3D:3.10.450.650 | MapMan:35.1 | InterPro:Cystatin | InterPro:Cystatin_dom | GO:GO:0003674 | GO:GO:0004869 |
| GO:GO:0030234 | PFAM:PD001231 | PFAM:PF16845 | ScanProsite:PS00287 | PANTHER:PTHR11413 | PANTHER:PTHR11413:SF45 |
| InterPro:Prot_inh_cystat_CS | SMART:SM00043 | SUPFAM:SSF54403 | SignalP:SignalP-TM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G331500 |
| EnsemblPlants:TraesCS3A01G331500.1 | TIGR:cd00042 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:+:576208955..576210078
Molecular Weight (calculated)
14842.1 Da
IEP (calculated)
5.257
GRAVY (calculated)
-0.014
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMWKYRVVG SVAALLLLLA IVVPFTQTQT QSARDKAAMA EDAGPLVGGI SDSPMGQEND LDVIALARFA XXXXXXXXNA LLEFENVVKV KKQTVAGTMH
101: YITIRVTEGG AKKLYEAKVW EKPWENFKKL EEFKLVEDVP SA
101: YITIRVTEGG AKKLYEAKVW EKPWENFKKL EEFKLVEDVP SA
001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ
Arabidopsis Description
CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.