Factsheet for Bra023365.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85699	Canola	cytosol	98.02	98.02
CDX91170	Canola	cytosol	98.02	98.02
Bra008912.1-P	Field mustard	cytosol	92.08	92.08
AT5G12140.1	Thale cress	cytosol	89.11	89.11
Zm00001d038558_P003	Maize	cytosol	52.48	48.18
TraesCS1D01G310300.1	Wheat	plastid	50.49	47.66
TraesCS1B01G322100.1	Wheat	mitochondrion	49.51	46.73
HORVU1Hr1G067980.1	Barley	cytosol	49.51	46.73
Bra016965.1-P	Field mustard	cytosol	41.58	45.16
Bra000210.1-P	Field mustard	cytosol, mitochondrion, plastid	39.6	42.55
KXG33568	Sorghum	extracellular	55.45	42.11
Zm00001d012561_P001	Maize	extracellular	55.45	41.79
Zm00001d043175_P001	Maize	extracellular	54.46	40.74
TraesCS3D01G325100.1	Wheat	extracellular, unclear	50.49	35.92
Os01t0803200-01	Rice	extracellular	48.51	35.0
HORVU3Hr1G078670.2	Barley	extracellular, nucleus	48.51	34.75
Os05t0494200-02	Rice	plastid	51.49	34.44
HORVU3Hr1G078680.1	Barley	cytosol	45.54	34.07
EES19739	Sorghum	mitochondrion	52.48	33.97
TraesCS5D01G502100.1	Wheat	cytosol	38.61	33.05
TraesCS3A01G331500.1	Wheat	extracellular	45.54	32.39
HORVU1Hr1G067870.1	Barley	plastid	49.51	32.26
TraesCS5D01G502600.1	Wheat	extracellular	41.58	29.58
TraesCS5A01G487700.1	Wheat	extracellular	40.59	28.87
TraesCS5D01G502200.1	Wheat	extracellular	39.6	27.78
Bra038725.1-P	Field mustard	cytosol	53.47	26.34
TraesCS5A01G487600.1	Wheat	extracellular	40.59	24.4
Bra034755.1-P	Field mustard	extracellular	53.47	24.22
KXG22254	Sorghum	cytosol, extracellular, mitochondrion, plastid	41.58	24.0
Bra005839.1-P	Field mustard	extracellular	40.59	17.9

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	ProteinID:ADK13075	ProteinID:ADK13075.1	EnsemblPlantsGene:Bra023365	EnsemblPlants:Bra023365.1
EnsemblPlants:Bra023365.1-P	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005783
GO:GO:0005829	GO:GO:0005886	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009611	GO:GO:0009628	GO:GO:0009987	GO:GO:0009991	GO:GO:0010466
GO:GO:0010951	GO:GO:0016020	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	GO:GO:0034605
GO:GO:0042631	GO:GO:0070417	EMBL:HM149300	UniProt:M4E3L2	PFAM:PD001231	PFAM:PF16845
ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403
UniParc:UPI00025433B4	:	:	:	:	:

Description

AT5G12140 (E=6e-048) ATCYS1 | ATCYS1 (A. thaliana cystatin-1); cysteine-type endopeptidase inhibitor

Coordinates

chrA02:-:3024224..3024600

Molecular Weight (calculated)

11245.3 Da

IEP (calculated)

6.100

GRAVY (calculated)

-0.490

Length

101 amino acids

Sequence
(BLAST)

001: MADQQGGTIV GGVRDVDANA NDLQVASLAR FAVDEHNKKE NVTLEYRRLL GAKTQVVAGT MHHLTVEVAD GETKKVYEAK VLEKAWENLK KLEDFNHVRD
101: V

Best Arabidopsis Sequence Match ( AT5G12140.1 )
(BLAST)

001: MADQQAGTIV GGVRDIDANA NDLQVESLAR FAVDEHNKNE NLTLEYKRLL GAKTQVVAGT MHHLTVEVAD GETNKVYEAK VLEKAWENLK QLESFNHLHD
101: V

Arabidopsis Description

CYS1Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178UCE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.