Factsheet for TraesCS1D01G310300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G067980.1	Barley	cytosol	97.2	97.2
TraesCS1B01G322100.1	Wheat	mitochondrion	96.26	96.26
Zm00001d038558_P003	Maize	cytosol	67.29	65.45
HORVU1Hr1G067870.1	Barley	plastid	94.39	65.16
Bra008912.1-P	Field mustard	cytosol	48.6	51.49
CDX97171	Canola	cytosol	48.6	51.49
CDX69704	Canola	cytosol	48.6	51.49
Os05t0494200-02	Rice	plastid	71.96	50.99
CDX91170	Canola	cytosol	47.66	50.49
CDX85699	Canola	cytosol	47.66	50.49
Bra023365.1-P	Field mustard	cytosol	47.66	50.49
AT5G12140.1	Thale cress	cytosol	45.79	48.51
TraesCS5D01G502100.1	Wheat	cytosol	51.4	46.61
EES19739	Sorghum	mitochondrion	67.29	46.15
TraesCS3D01G325100.1	Wheat	extracellular, unclear	60.75	45.77
TraesCS5D01G502200.1	Wheat	extracellular	53.27	39.58
TraesCS5D01G502600.1	Wheat	extracellular	50.47	38.03
KXG22254	Sorghum	cytosol, extracellular, mitochondrion, plastid	57.94	35.43
TraesCS1D01G255800.1	Wheat	extracellular	39.25	24.71
TraesCS3D01G189800.1	Wheat	plastid	45.79	20.16

Protein Annotations

EnsemblPlants:TraesCS1D01G310300.1	EnsemblPlantsGene:TraesCS1D01G310300	Gene3D:3.10.450.650	GO:GO:0003674	GO:GO:0004869	GO:GO:0030234
InterPro:Cystatin	InterPro:Cystatin_dom	InterPro:Prot_inh_cystat_CS	PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	PFAM:PD001231
PFAM:PF16845	ScanProsite:PS00287	SEG:seg	SMART:SM00043	SUPFAM:SSF54403	TIGR:cd00042
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:406552280..406552781

Molecular Weight (calculated)

11788.1 Da

IEP (calculated)

7.518

GRAVY (calculated)

-0.361

Length

107 amino acids

Sequence
(BLAST)

001: MAEAAQGGGL RGRGALLGGV QDAPAGREND LETIELARFA VAEHNTKANA LLEFERLVKV RQQVVAGCMH YFTIEVKEGG AKKLYEAKVW EKAWENFKQL
101: QDFKPAA

Best Arabidopsis Sequence Match ( AT5G12140.1 )
(BLAST)

001: MADQQAGTIV GGVRDIDANA NDLQVESLAR FAVDEHNKNE NLTLEYKRLL GAKTQVVAGT MHHLTVEVAD GETNKVYEAK VLEKAWENLK QLESFNHLHD
101: V

Arabidopsis Description

CYS1Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178UCE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.