Factsheet for HORVU1Hr1G067980.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
vacuole 1
cytosol 2
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

cytosol: 19759340
endoplasmic reticulum: 19759340
golgi: 19759340
nucleus: 19759340

gfp PMID: 19759340 doi

M Martinez, I Cambra, L Carrillo, M Diaz-Mendoza, I Diaz

Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid, Campus Montegancedo Universidad Politécnica de Madrid, 28223-Pozuelo de Alarcón, Madrid, Spain.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G310300.1	Wheat	plastid	97.2	97.2
TraesCS1B01G322100.1	Wheat	mitochondrion	97.2	97.2
HORVU1Hr1G067870.1	Barley	plastid	97.2	67.1
Zm00001d038558_P003	Maize	cytosol	67.29	65.45
Os05t0494200-02	Rice	plastid	71.96	50.99
CDX97171	Canola	cytosol	47.66	50.49
CDX69704	Canola	cytosol	47.66	50.49
Bra008912.1-P	Field mustard	cytosol	47.66	50.49
CDX85699	Canola	cytosol	46.73	49.51
CDX91170	Canola	cytosol	46.73	49.51
Bra023365.1-P	Field mustard	cytosol	46.73	49.51
AT5G12140.1	Thale cress	cytosol	45.79	48.51
EES19739	Sorghum	mitochondrion	67.29	46.15
HORVU3Hr1G078670.2	Barley	extracellular, nucleus	60.75	46.1
HORVU3Hr1G078680.1	Barley	cytosol	54.21	42.96
KXG22254	Sorghum	cytosol, extracellular, mitochondrion, plastid	57.94	35.43
HORVU1Hr1G063320.1	Barley	endoplasmic reticulum, golgi	40.19	17.34
HORVU3Hr1G038190.1	Barley	endoplasmic reticulum, golgi, nucleus	45.79	16.07

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	EMBL:AK363959	EMBL:AK368309	InterPro:Cystatin	InterPro:Cystatin_dom
UniProt:F2DJ91	GO:GO:0003674	GO:GO:0004869	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234
GO:GO:0030414	EnsemblPlantsGene:HORVU1Hr1G067980	EnsemblPlants:HORVU1Hr1G067980.1	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287
PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	UniParc:UPI0000526204
SEG:seg	:	:	:	:	:

Description

Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:F2DJ91]

Coordinates

chrchr1H:+:479734808..479735555

Molecular Weight (calculated)

11800.2 Da

IEP (calculated)

7.518

GRAVY (calculated)

-0.315

Length

107 amino acids

Sequence
(BLAST)

001: MAEAAQGGGL RGRGVLLGGV QDAPAGREND LETIELARFA VAEHNAKANA LLEFERLVKV RQQVVAGCMH YFTIEVKEGG AKKLYEAKVW EKAWENFKQL
101: QEFKPAA

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.