CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85699	Canola	cytosol	100.0	100.0
Bra023365.1-P	Field mustard	cytosol	98.02	98.02
CDX97171	Canola	cytosol	93.07	93.07
CDX69704	Canola	cytosol	91.09	91.09
AT5G12140.1	Thale cress	cytosol	91.09	91.09
Zm00001d038558_P003	Maize	cytosol	52.48	48.18
TraesCS1D01G310300.1	Wheat	plastid	50.49	47.66
TraesCS1B01G322100.1	Wheat	mitochondrion	49.51	46.73
HORVU1Hr1G067980.1	Barley	cytosol	49.51	46.73
CDY14748	Canola	cytosol	40.59	44.09
CDY22487	Canola	mitochondrion	40.59	44.09
CDY35433	Canola	cytosol	38.61	41.49
KXG33568	Sorghum	extracellular	54.46	41.35
Zm00001d012561_P001	Maize	extracellular	54.46	41.04
Zm00001d043175_P001	Maize	extracellular	53.47	40.0
TraesCS3D01G325100.1	Wheat	extracellular, unclear	50.49	35.92
HORVU3Hr1G078670.2	Barley	extracellular, nucleus	48.51	34.75
Os05t0494200-02	Rice	plastid	51.49	34.44
Os01t0803200-01	Rice	extracellular	47.52	34.29
HORVU3Hr1G078680.1	Barley	cytosol	45.54	34.07
EES19739	Sorghum	mitochondrion	52.48	33.97
CDY06956	Canola	extracellular	42.57	33.08
TraesCS5D01G502100.1	Wheat	cytosol	38.61	33.05
CDY14750	Canola	extracellular	41.58	32.56
TraesCS3A01G331500.1	Wheat	extracellular	45.54	32.39
HORVU1Hr1G067870.1	Barley	plastid	49.51	32.26
TraesCS5D01G502600.1	Wheat	extracellular	41.58	29.58
TraesCS5A01G487700.1	Wheat	extracellular	40.59	28.87
TraesCS5D01G502200.1	Wheat	extracellular	39.6	27.78
CDY42150	Canola	cytosol	53.47	26.6
CDY50343	Canola	cytosol	53.47	26.34
TraesCS5A01G487600.1	Wheat	extracellular	40.59	24.4
KXG22254	Sorghum	cytosol, extracellular, mitochondrion, plastid	41.58	24.0
CDY08429	Canola	extracellular	53.47	23.58
CDY08430	Canola	extracellular	50.49	21.79
CDY50523	Canola	cytosol	30.69	20.67
CDX80942	Canola	extracellular	40.59	17.98
CDY52136	Canola	extracellular	38.61	17.03
CDY03938	Canola	extracellular	34.65	16.67

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	GO:A0A078DPD7	EnsemblPlants:CDX91170	ProteinID:CDX91170	ProteinID:CDX91170.1
InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869	GO:GO:0030234	EnsemblPlantsGene:GSBRNA2T00151973001
PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	InterPro:Prot_inh_cystat_CS
SMART:SM00043	SUPFAM:SSF54403	UniParc:UPI0004EB6199	:	:	:

Description

BnaC02g04270D

Coordinates

chrLK031865:+:1211182..1212302

Molecular Weight (calculated)

11317.4 Da

IEP (calculated)

5.612

GRAVY (calculated)

-0.540

Length

101 amino acids

Sequence
(BLAST)

001: MADQQGGTIV GGVRDIDANA NDLQVESLAR FAVDEHNKKE NVTLEYRRLL GAKTQVVAGT MHHLTVEVAD GETKKVYEAK VLEKAWENLK KLEDFNHVRD
101: V

Best Arabidopsis Sequence Match ( AT5G12140.1 )
(BLAST)

001: MADQQAGTIV GGVRDIDANA NDLQVESLAR FAVDEHNKNE NLTLEYKRLL GAKTQVVAGT MHHLTVEVAD GETNKVYEAK VLEKAWENLK QLESFNHLHD
101: V

Arabidopsis Description

CYS1Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178UCE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.