Factsheet for HORVU3Hr1G078670.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

nucleus: 27142171

msms PMID: 27142171 doi

Z Zeng, J Jiang

Department of Horticulture, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G325100.1	Wheat	extracellular, unclear	91.49	90.85
TraesCS3A01G331500.1	Wheat	extracellular	84.4	83.8
HORVU1Hr1G067980.1	Barley	cytosol	46.1	60.75
HORVU3Hr1G078680.1	Barley	cytosol	58.16	60.74
AT5G12140.1	Thale cress	cytosol	34.75	48.51
Bra008912.1-P	Field mustard	cytosol	34.75	48.51
Bra023365.1-P	Field mustard	cytosol	34.75	48.51
CDX69704	Canola	cytosol	34.75	48.51
CDX85699	Canola	cytosol	34.75	48.51
CDX91170	Canola	cytosol	34.75	48.51
CDX97171	Canola	cytosol	34.75	48.51
Os01t0803200-01	Rice	extracellular	46.1	46.43
HORVU1Hr1G067870.1	Barley	plastid	49.65	45.16
HORVU1Hr1G063320.1	Barley	endoplasmic reticulum, golgi	28.37	16.13
HORVU3Hr1G038190.1	Barley	endoplasmic reticulum, golgi, nucleus	33.33	15.41

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	UniProt:A0A287LTS4	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674
GO:GO:0004869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951
GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	EnsemblPlantsGene:HORVU3Hr1G078670	EnsemblPlants:HORVU3Hr1G078670.2	PFAM:PD001231
PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	InterPro:Prot_inh_cystat_CS	SMART:SM00043
SUPFAM:SSF54403	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000B461081	SEG:seg	:

Description

Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A287LTS4]

Coordinates

chrchr3H:+:579747589..579748415

Molecular Weight (calculated)

15838.3 Da

IEP (calculated)

5.284

GRAVY (calculated)

-0.099

Length

141 amino acids

Sequence
(BLAST)

001: MEMWKYRVLG SVAALLLLLA VVVPFTQTWT QSARDKAAMA EDAGPLMGGI EDSPMGQEND LDVIALARFA VSEHNKKNAL LEFENVVKLK KQTVAGTMYY
101: ITIRVTEGGT KKLYEAKVWE KLWENFKQLE EFKPVQDAAI A

Best Arabidopsis Sequence Match ( AT3G12490.1 )
(BLAST)

001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.