Factsheet for TraesCS3D01G325100.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G078670.2	Barley	extracellular, nucleus	90.85	91.49
TraesCS3A01G331500.1	Wheat	extracellular	88.03	88.03
TraesCS1D01G310300.1	Wheat	plastid	45.77	60.75
HORVU3Hr1G078680.1	Barley	cytosol	53.52	56.3
TraesCS5D01G502200.1	Wheat	extracellular	51.41	50.69
Bra023365.1-P	Field mustard	cytosol	35.92	50.49
CDX85699	Canola	cytosol	35.92	50.49
CDX91170	Canola	cytosol	35.92	50.49
Bra008912.1-P	Field mustard	cytosol	35.21	49.51
CDX97171	Canola	cytosol	35.21	49.51
TraesCS5D01G502100.1	Wheat	cytosol	40.85	49.15
CDX69704	Canola	cytosol	34.51	48.51
AT5G12140.1	Thale cress	cytosol	34.51	48.51
TraesCS5D01G502600.1	Wheat	extracellular	47.89	47.89
Os01t0803200-01	Rice	extracellular	45.07	45.71
TraesCS1D01G255800.1	Wheat	extracellular	31.69	26.47
TraesCS3D01G189800.1	Wheat	plastid	34.51	20.16

Protein Annotations

EnsemblPlants:TraesCS3D01G325100.1	EnsemblPlantsGene:TraesCS3D01G325100	Gene3D:3.10.450.650	GO:GO:0003674	GO:GO:0004869	GO:GO:0030234
InterPro:Cystatin	InterPro:Cystatin_dom	InterPro:Prot_inh_cystat_CS	PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	PFAM:PD001231
PFAM:PF16845	ScanProsite:PS00287	SEG:seg	SignalP:SignalP-noTM	SMART:SM00043	SUPFAM:SSF54403
TIGR:cd00042	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3D:+:437966564..437967360

Molecular Weight (calculated)

15715.1 Da

IEP (calculated)

6.545

GRAVY (calculated)

-0.056

Length

142 amino acids

Sequence
(BLAST)

001: MEMWKYRVVG SVAALLLLLA VVVPFTQTQT QSARDKAAMA EDAGPLVGGI KDSPMGQEND LDVIALARFA VSEHNNKANA LLEFENVVKL KKQIVAGTMH
101: FITIRVTEGG AKKLYEAKVW EKPWENFKKL EEFKPVEDAA IA

Best Arabidopsis Sequence Match ( AT3G12490.1 )
(BLAST)

001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.