Factsheet for TraesCS5D01G502200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G487700.1	Wheat	extracellular	87.5	88.73
TraesCS5D01G502600.1	Wheat	extracellular	59.03	59.86
TraesCS5D01G502100.1	Wheat	cytosol	43.75	53.39
TraesCS1D01G310300.1	Wheat	plastid	39.58	53.27
TraesCS3D01G325100.1	Wheat	extracellular, unclear	50.69	51.41
Os01t0803200-01	Rice	extracellular	47.92	49.29
Bra008912.1-P	Field mustard	cytosol	27.78	39.6
Bra023365.1-P	Field mustard	cytosol	27.78	39.6
CDX85699	Canola	cytosol	27.78	39.6
CDX91170	Canola	cytosol	27.78	39.6
CDX97171	Canola	cytosol	27.78	39.6
CDX69704	Canola	cytosol	27.08	38.61
AT5G12140.1	Thale cress	cytosol	26.39	37.62
TraesCS1D01G255800.1	Wheat	extracellular	31.94	27.06
TraesCS3D01G189800.1	Wheat	plastid	37.5	22.22

Protein Annotations

EnsemblPlants:TraesCS5D01G502200.1	EnsemblPlantsGene:TraesCS5D01G502200	Gene3D:3.10.450.650	GO:GO:0003674	GO:GO:0004869	GO:GO:0030234
InterPro:Cystatin	InterPro:Cystatin_dom	InterPro:Prot_inh_cystat_CS	PANTHER:PTHR11413	PANTHER:PTHR11413:SF45	PFAM:PD001231
PFAM:PF16845	ScanProsite:PS00287	SEG:seg	SignalP:SignalP-TM	SMART:SM00043	SUPFAM:SSF54403
TIGR:cd00042	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:+:529815804..529816462

Molecular Weight (calculated)

16308.1 Da

IEP (calculated)

8.883

GRAVY (calculated)

-0.092

Length

144 amino acids

Sequence
(BLAST)

001: MEMRRYHRVL RSVAAPALLL LLLLTLVLPF IQTQMQSARE KAADELPLDG GIVDTPGAEN DLRIVDLARF AVSEHKNRTN ALLEFEKVVK LKQQVVAGMM
101: YYITIQVNEG GAKKMYEAKV WEQPWMDFKK LMEFRPAEGA SASA

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.