Factsheet for HORVU3Hr1G038190.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, nucleus

Predictor Summary:

plastid 3
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, nucleus
Any Predictor:	cytosol, extracellular, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	plastid
YLoc:	cytosol

endoplasmic reticulum: 19759340
golgi: 19759340
nucleus: 19759340

gfp PMID: 19759340 doi

M Martinez, I Cambra, L Carrillo, M Diaz-Mendoza, I Diaz

Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid, Campus Montegancedo Universidad Politécnica de Madrid, 28223-Pozuelo de Alarcón, Madrid, Spain.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G189800.1	Wheat	plastid	77.38	97.12
TraesCS3B01G215400.1	Wheat	extracellular	76.72	96.3
TraesCS3A01G185800.1	Wheat	extracellular	76.72	96.3
Os01t0270100-01	Rice	plasma membrane	62.62	76.4
GSMUA_AchrUn_...	Banana	cytosol	23.28	73.96
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	58.69	73.06
EES02749	Sorghum	extracellular	57.38	72.92
VIT_13s0084g00050.t01	Wine grape	cytosol	42.3	64.18
CDY42150	Canola	cytosol	42.62	64.04
CDY50343	Canola	cytosol	41.97	62.44
Bra038725.1-P	Field mustard	cytosol	41.64	61.95
PGSC0003DMT400068064	Potato	cytosol	39.02	59.2
Bra034755.1-P	Field mustard	extracellular	42.62	58.3
AT3G12490.2	Thale cress	extracellular	43.93	57.27
CDY08429	Canola	extracellular	42.95	57.21
CDY08430	Canola	extracellular	42.3	55.13
KRH20612	Soybean	endoplasmic reticulum	43.28	53.88
KRH13275	Soybean	mitochondrion	42.95	53.47
CDY50523	Canola	cytosol	25.9	52.67
Solyc03g097270.2.1	Tomato	extracellular	39.34	51.06
CDY03938	Canola	extracellular	35.08	50.95
HORVU1Hr1G067980.1	Barley	cytosol	16.07	45.79
HORVU1Hr1G067870.1	Barley	plastid	17.38	34.19
HORVU3Hr1G078670.2	Barley	extracellular, nucleus	15.41	33.33
HORVU3Hr1G078680.1	Barley	cytosol	14.1	31.85
HORVU1Hr1G063320.1	Barley	endoplasmic reticulum, golgi	21.64	26.61

Protein Annotations

Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	UniProt:A0A287KT66	InterPro:Cystatin	InterPro:Cystatin_dom
GO:GO:0003674	GO:GO:0004869	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010466	GO:GO:0010951	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	GO:GO:0030234
GO:GO:0030414	EnsemblPlantsGene:HORVU3Hr1G038190	EnsemblPlants:HORVU3Hr1G038190.1	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287
PANTHER:PTHR11413	PANTHER:PTHR11413:SF56	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	TMHMM:TMhelix
UniParc:UPI000B468C96	SEG:seg	:	:	:	:

Description

Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A287KT66]

Coordinates

chrchr3H:+:219953557..219956556

Molecular Weight (calculated)

33959.5 Da

IEP (calculated)

10.116

GRAVY (calculated)

-0.491

Length

305 amino acids

Sequence
(BLAST)

001: TRRDGDAPSP RPLRSFSLPQ CRIQTLPTHT HFTTHEAKRN RKALFRQTHE AKRNRKGLFR QSMRVAATRP VSSAPVALLA ALALLFLVGS ASLAIGTMAS
101: HVLGGKSENP AAANSLETDG LARFAVDEHN KRENALLEFV RVVEAKEQTV AGTLHHLTLE ALEAGRKKVY EAKVWVKPWL DSKELQEFRH TGDATSFTIS
201: DLGAKRGGHE PGWRDVPVHD PVVKDAASHA VKSIQERSNS LFPYELIEIV RAKAEVVEDF AKFDIVMKLK RGTKEEKMKA EVHKNLEGAF VLNQMQPEHD
301: ESSSQ

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.