CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
vacuole 2
mitochondrion 4
extracellular 2
nucleus 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion, nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

endoplasmic reticulum: 27224218
mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20612	Soybean	endoplasmic reticulum	93.88	93.88
VIT_13s0084g00050.t01	Wine grape	cytosol	59.18	72.14
GSMUA_AchrUn_...	Banana	cytosol	27.35	69.79
CDY42150	Canola	cytosol	56.73	68.47
Bra038725.1-P	Field mustard	cytosol	55.51	66.34
CDY50343	Canola	cytosol	55.51	66.34
GSMUA_Achr3P18480_001	Banana	cytosol, unclear	55.51	65.7
PGSC0003DMT400068064	Potato	cytosol	53.88	65.67
KRG89741	Soybean	cytosol	25.31	63.92
Bra034755.1-P	Field mustard	extracellular	56.73	62.33
KRH18619	Soybean	cytosol	24.49	61.86
CDY08429	Canola	extracellular	56.33	60.26
AT3G12490.2	Thale cress	extracellular	57.55	60.26
CDY08430	Canola	extracellular	56.33	58.97
Os01t0270100-01	Rice	plasma membrane	58.37	57.2
Solyc03g097270.2.1	Tomato	extracellular	54.29	56.6
KRH14629	Soybean	cytosol	23.27	55.34
CDY03938	Canola	extracellular	46.94	54.76
TraesCS3A01G185800.1	Wheat	extracellular	54.29	54.73
TraesCS3D01G189800.1	Wheat	plastid	54.29	54.73
TraesCS3B01G215400.1	Wheat	extracellular	53.88	54.32
CDY50523	Canola	cytosol	32.24	52.67
KRG98869	Soybean	cytosol	21.63	52.48
EES02749	Sorghum	extracellular	50.61	51.67
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	51.02	51.02
HORVU3Hr1G038190.1	Barley	endoplasmic reticulum, golgi, nucleus	53.47	42.95
KRH14630	Soybean	cytosol	26.94	33.0
TraesCS1D01G255800.1	Wheat	extracellular	22.04	31.76
Zm00001d010290_P001	Maize	extracellular	21.22	29.55
TraesCS1B01G267100.1	Wheat	extracellular	21.63	29.44
EES18222	Sorghum	extracellular	20.82	29.31
TraesCS1A01G256400.1	Wheat	extracellular	21.63	29.28
Os05t0409300-01	Rice	extracellular, mitochondrion	21.63	28.8
KRH14632	Soybean	cytosol	21.63	28.8
Zm00001d038173_P003	Maize	extracellular	20.0	28.32
HORVU1Hr1G063320.1	Barley	endoplasmic reticulum, golgi	21.63	21.37

Protein Annotations

Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	EntrezGene:547777	EMBL:ACUP02009680	ProteinID:BAA19610.1
InterPro:Cystatin	InterPro:Cystatin_dom	EMBL:D31700	EnsemblPlantsGene:GLYMA_15G227500	GO:GO:0002020	GO:GO:0003674
GO:GO:0004869	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	GO:GO:2000117
MEROPS:I25.014	EnsemblPlants:KRH13275	ProteinID:KRH13275	ProteinID:KRH13275.1	UniProt:O04720	PFAM:PD001231
PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF56	InterPro:Prot_inh_cystat_CS	SMART:SM00043
SUPFAM:SSF54403	SignalP:SignalP-noTM	UniParc:UPI00000A23A2	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:42044582..42049151

Molecular Weight (calculated)

27620.5 Da

IEP (calculated)

7.962

GRAVY (calculated)

-0.563

Length

245 amino acids

Sequence
(BLAST)

001: MRALTSSSST FIPKRYSFFF FLSILFALRS SSGGCSEYHH HHAPMATIGG LRDSQGSQNS VQTEALARFA VDEHNKKQNS LLEFSRVVRT QEQVVAGTLH
101: HLTLEAIEAG EKKLYEAKVW VKPWLNFKEL QEFKPAGDVP SFTSADLGVK KDGHQPGWQS VPTHDPQVQD AANHAIKTIQ QRSNSLVPYE LHEVADAKAE
201: VIDDFAKFNL LLKVKRGQKE EKFKVEVHKN NQGGFHLNQM EQDHS

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.