Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 4
- mitochondrion 2
- extracellular 4
- endoplasmic reticulum 3
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
plastid: 27992503 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G189800.1 | Wheat | plastid | 78.0 | 80.25 |
| TraesCS3B01G215400.1 | Wheat | extracellular | 77.6 | 79.84 |
| TraesCS3A01G185800.1 | Wheat | extracellular | 77.2 | 79.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.4 | 73.96 |
| EES02749 | Sorghum | extracellular | 70.4 | 73.33 |
| Zm00001d008268_P002 | Maize | endoplasmic reticulum, extracellular | 71.6 | 73.06 |
| CDY42150 | Canola | cytosol | 54.4 | 67.0 |
| CDY50343 | Canola | cytosol | 54.0 | 65.85 |
| VIT_13s0084g00050.t01 | Wine grape | cytosol | 52.8 | 65.67 |
| Bra038725.1-P | Field mustard | cytosol | 53.2 | 64.88 |
| HORVU3Hr1G038190.1 | Barley | endoplasmic reticulum, golgi, nucleus | 76.4 | 62.62 |
| Bra034755.1-P | Field mustard | extracellular | 55.2 | 61.88 |
| KRH20612 | Soybean | endoplasmic reticulum | 59.2 | 60.41 |
| AT3G12490.2 | Thale cress | extracellular | 56.4 | 60.26 |
| PGSC0003DMT400068064 | Potato | cytosol | 48.0 | 59.7 |
| CDY08429 | Canola | extracellular | 54.0 | 58.95 |
| KRH13275 | Soybean | mitochondrion | 57.2 | 58.37 |
| CDY08430 | Canola | extracellular | 53.2 | 56.84 |
| CDY50523 | Canola | cytosol | 33.2 | 55.33 |
| CDY03938 | Canola | extracellular | 44.8 | 53.33 |
| Solyc03g097270.2.1 | Tomato | extracellular | 48.8 | 51.91 |
| Os01t0803200-01 | Rice | extracellular | 22.8 | 40.71 |
| Os05t0409300-01 | Rice | extracellular, mitochondrion | 25.2 | 34.24 |
| Os05t0494200-02 | Rice | plastid | 19.6 | 32.45 |
Protein Annotations
| Gene3D:3.10.450.10 | Gene3D:3.10.450.650 | MapMan:35.1 | EntrezGene:4326272 | EMBL:AK119511 | ProteinID:BAD81175.1 |
| ProteinID:BAF04616.1 | ProteinID:BAS71500.1 | ProteinID:BAS71501.1 | InterPro:Cystatin | InterPro:Cystatin_dom | GO:GO:0002020 |
| GO:GO:0003674 | GO:GO:0004869 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010466 |
| GO:GO:0010951 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0030414 | GO:GO:2000117 | MEROPS:I25.014 |
| EnsemblPlantsGene:Os01g0270100 | EnsemblPlants:Os01t0270100-01 | PFAM:PD001231 | PFAM:PF16845 | ScanProsite:PS00287 | PANTHER:PTHR11413 |
| PANTHER:PTHR11413:SF56 | InterPro:Prot_inh_cystat_CS | UniProt:Q0JNR2 | SMART:SM00043 | SUPFAM:SSF54403 | TMHMM:TMhelix |
| UniParc:UPI000009C8BF | RefSeq:XP_015621945.1 | SEG:seg | : | : | : |
Description
Similar to Cysteine protease inhibitor. (Os01t0270100-01);Similar to cDNA clone:001-200-C04, full insert sequence. (Os01t0270100-02)
Coordinates
chr1:-:9325699..9329331
Molecular Weight (calculated)
27270.4 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.212
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVAATTRPA SSSAAAPLPL FLLLAVAAAA AALFLVGSAS LAMAGHVLGG AHDAPSAANS VETDALARFA VDEHNKRENA LLEFVRVVEA KEQVVAGTLH
101: HLTLEALEAG RKKVYEAKVW VKPWLDFKEL QEFRNTGDAT TFTNADLGAK KGGHEPGWRD VPVHDPVVKD AADHAVKSIQ QRSNSLFPYE LLEIVRAKAE
201: VVEDFAKFDI LMKLKRGNKE EKFKAEVHKN LEGAFVLNQM QQEHDESSSQ
101: HLTLEALEAG RKKVYEAKVW VKPWLDFKEL QEFRNTGDAT TFTNADLGAK KGGHEPGWRD VPVHDPVVKD AADHAVKSIQ QRSNSLFPYE LLEIVRAKAE
201: VVEDFAKFDI LMKLKRGNKE EKFKAEVHKN LEGAFVLNQM QQEHDESSSQ
001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD
Arabidopsis Description
CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.