Factsheet for TraesCS3A01G185800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G189800.1	Wheat	plastid	99.18	99.18
TraesCS3B01G215400.1	Wheat	extracellular	98.35	98.35
Os01t0270100-01	Rice	plasma membrane	79.42	77.2
HORVU3Hr1G038190.1	Barley	endoplasmic reticulum, golgi, nucleus	96.3	76.72
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	74.49	73.88
EES02749	Sorghum	extracellular	72.84	73.75
GSMUA_AchrUn_...	Banana	cytosol	28.81	72.92
CDY42150	Canola	cytosol	54.73	65.52
VIT_13s0084g00050.t01	Wine grape	cytosol	53.91	65.17
CDY50343	Canola	cytosol	53.09	62.93
Bra038725.1-P	Field mustard	cytosol	52.67	62.44
PGSC0003DMT400068064	Potato	cytosol	49.79	60.2
Bra034755.1-P	Field mustard	extracellular	54.32	59.19
CDY08429	Canola	extracellular	55.14	58.52
AT3G12490.2	Thale cress	extracellular	55.97	58.12
CDY08430	Canola	extracellular	54.32	56.41
KRH20612	Soybean	endoplasmic reticulum	55.14	54.69
KRH13275	Soybean	mitochondrion	54.73	54.29
Solyc03g097270.2.1	Tomato	extracellular	49.79	51.49
CDY50523	Canola	cytosol	31.69	51.33
CDY03938	Canola	extracellular	44.03	50.95
TraesCS5A01G487700.1	Wheat	extracellular	22.22	38.03
TraesCS3A01G331500.1	Wheat	extracellular	19.75	33.8
TraesCS1A01G256400.1	Wheat	extracellular	23.87	32.04
TraesCS5A01G487600.1	Wheat	extracellular	20.58	29.76

Protein Annotations

Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674
GO:GO:0004869	GO:GO:0030234	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413
PANTHER:PTHR11413:SF56	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	SignalP:SignalP-TM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3A01G185800	EnsemblPlants:TraesCS3A01G185800.1	TIGR:cd00042	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:-:218117742..218120346

Molecular Weight (calculated)

26606.8 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.249

Length

243 amino acids

Sequence
(BLAST)

001: MRVAATRPAS SAPVALLAAL ALLFLVGSAS LAIGAMASHV LGGKSENPAA ANSLETDGLA RFAVDEHNKR ENALLEFVRV VEAKEQTVAG TVHHLTLEAL
101: EAGRKKLYEA KVWVKPWLDF KELQEFRHTG DATSFTISDL GAKRGGHEPG WRDVPVHDPV VKDAASHAVK SIQQRSNSLL PYELVEIVRA KAEVVEDFAK
201: FDILMKLKRG TKEEKMKAEV HKNLEGAFVL NQMQPEHDES SSQ

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.