Factsheet for VIT_13s0084g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	34.83	72.92
CDY42150	Canola	cytosol	68.16	67.49
Bra038725.1-P	Field mustard	cytosol	68.66	67.32
GSMUA_Achr3P18480_001	Banana	cytosol, unclear	69.15	67.15
CDY50343	Canola	cytosol	68.16	66.83
PGSC0003DMT400068064	Potato	cytosol	66.67	66.67
VIT_08s0040g00770.t01	Wine grape	cytosol	64.18	62.93
Bra034755.1-P	Field mustard	extracellular	67.66	60.99
VIT_06s0009g02230.t01	Wine grape	cytosol	30.35	60.4
KRH20612	Soybean	endoplasmic reticulum	73.13	60.0
CDY08429	Canola	extracellular	68.16	59.83
KRH13275	Soybean	mitochondrion	72.14	59.18
AT3G12490.2	Thale cress	extracellular	67.66	58.12
CDY08430	Canola	extracellular	67.16	57.69
Solyc03g097270.2.1	Tomato	extracellular	66.67	57.02
TraesCS3A01G185800.1	Wheat	extracellular	65.17	53.91
TraesCS3D01G189800.1	Wheat	plastid	65.17	53.91
TraesCS3B01G215400.1	Wheat	extracellular	64.68	53.5
EES02749	Sorghum	extracellular	63.68	53.33
Os01t0270100-01	Rice	plasma membrane	65.67	52.8
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	63.68	52.24
CDY03938	Canola	extracellular	53.23	50.95
CDY50523	Canola	cytosol	37.31	50.0
HORVU3Hr1G038190.1	Barley	endoplasmic reticulum, golgi, nucleus	64.18	42.3

Protein Annotations

EntrezGene:100260839	wikigene:100260839	Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	ProteinID:CCB58610
ProteinID:CCB58610.1	InterPro:Cystatin	InterPro:Cystatin_dom	UniProt:F6HV98	EMBL:FN596254	GO:GO:0002020
GO:GO:0003674	GO:GO:0004869	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010466	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	GO:GO:2000117
EntrezGene:LOC100260839	wikigene:LOC100260839	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413
PANTHER:PTHR11413:SF56	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	TIGR:TC52700	UniParc:UPI0001985A77
ArrayExpress:VIT_13s0084g00050	EnsemblPlantsGene:VIT_13s0084g00050	EnsemblPlants:VIT_13s0084g00050.t01	unigene:Vvi.663	RefSeq:XP_002267841	RefSeq:XP_002267841.1
RefSeq:XP_003633519	RefSeq:XP_003633519.1	:	:	:	:

Description

Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:F6HV98]

Coordinates

chr13:-:18556390..18561669

Molecular Weight (calculated)

22575.8 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.637

Length

201 amino acids

Sequence
(BLAST)

001: MATLGGVQES QGTQNSAEID SLARFAVEEH NKKENALLEF ARVVKAEEQV VAGTLHHLTL EVIDAGRKKL YEAKVWVKPW MNFKELQEFK HAGDVPTLTP
101: SDLGVKKDGH GPGWQEVPAH DPEVQNAANH AIKTLQQRSN SIFPHELQEI LLAKAEVSQN LVKFDMLLKV KRGDKEEKYK VEVHKNNEGA YQLNQMAPDH
201: S

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.