Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 6
- extracellular 5
- endoplasmic reticulum 4
- plasma membrane 4
- golgi 5
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
endoplasmic reticulum: 23041469 endoplasmic reticulum: 27224218 mitochondrion: 27780359 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
27780359
doi
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13275 | Soybean | mitochondrion | 93.88 | 93.88 |
| VIT_13s0084g00050.t01 | Wine grape | cytosol | 60.0 | 73.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.57 | 72.92 |
| CDY42150 | Canola | cytosol | 57.55 | 69.46 |
| Bra038725.1-P | Field mustard | cytosol | 56.33 | 67.32 |
| CDY50343 | Canola | cytosol | 56.33 | 67.32 |
| PGSC0003DMT400068064 | Potato | cytosol | 55.1 | 67.16 |
| GSMUA_Achr3P18480_001 | Banana | cytosol, unclear | 56.73 | 67.15 |
| KRG89741 | Soybean | cytosol | 25.71 | 64.95 |
| Bra034755.1-P | Field mustard | extracellular | 58.37 | 64.13 |
| KRH18619 | Soybean | cytosol | 24.9 | 62.89 |
| AT3G12490.2 | Thale cress | extracellular | 60.0 | 62.82 |
| CDY08429 | Canola | extracellular | 57.14 | 61.14 |
| CDY08430 | Canola | extracellular | 57.55 | 60.26 |
| Os01t0270100-01 | Rice | plasma membrane | 60.41 | 59.2 |
| Solyc03g097270.2.1 | Tomato | extracellular | 55.1 | 57.45 |
| KRH14629 | Soybean | cytosol | 23.67 | 56.31 |
| CDY03938 | Canola | extracellular | 47.35 | 55.24 |
| TraesCS3A01G185800.1 | Wheat | extracellular | 54.69 | 55.14 |
| TraesCS3D01G189800.1 | Wheat | plastid | 54.69 | 55.14 |
| TraesCS3B01G215400.1 | Wheat | extracellular | 54.29 | 54.73 |
| EES02749 | Sorghum | extracellular | 51.84 | 52.92 |
| CDY50523 | Canola | cytosol | 32.24 | 52.67 |
| KRG98869 | Soybean | cytosol | 21.63 | 52.48 |
| Zm00001d008268_P002 | Maize | endoplasmic reticulum, extracellular | 51.84 | 51.84 |
| HORVU3Hr1G038190.1 | Barley | endoplasmic reticulum, golgi, nucleus | 53.88 | 43.28 |
| KRH14630 | Soybean | cytosol | 27.76 | 34.0 |
| TraesCS1D01G255800.1 | Wheat | extracellular | 22.45 | 32.35 |
| Zm00001d010290_P001 | Maize | extracellular | 22.04 | 30.68 |
| EES18222 | Sorghum | extracellular | 21.63 | 30.46 |
| TraesCS1B01G267100.1 | Wheat | extracellular | 22.04 | 30.0 |
| KRH14632 | Soybean | cytosol | 22.45 | 29.89 |
| Zm00001d038173_P003 | Maize | extracellular | 20.82 | 29.48 |
| TraesCS1A01G256400.1 | Wheat | extracellular | 21.63 | 29.28 |
| Os05t0409300-01 | Rice | extracellular, mitochondrion | 21.63 | 28.8 |
| HORVU1Hr1G063320.1 | Barley | endoplasmic reticulum, golgi | 22.04 | 21.77 |
Protein Annotations
| Gene3D:3.10.450.10 | Gene3D:3.10.450.650 | MapMan:35.1 | EMBL:ACUP02008281 | InterPro:Cystatin | InterPro:Cystatin_dom |
| EnsemblPlantsGene:GLYMA_13G189500 | GO:GO:0002020 | GO:GO:0003674 | GO:GO:0004869 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010466 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0030414 | GO:GO:2000117 | UniProt:I1M0K3 | EnsemblPlants:KRH20612 | ProteinID:KRH20612 | ProteinID:KRH20612.1 |
| PFAM:PD001231 | PFAM:PF16845 | ScanProsite:PS00287 | PANTHER:PTHR11413 | PANTHER:PTHR11413:SF56 | InterPro:Prot_inh_cystat_CS |
| SMART:SM00043 | SUPFAM:SSF54403 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00023CE96F | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:30296749..30300668
Molecular Weight (calculated)
27669.5 Da
IEP (calculated)
7.093
GRAVY (calculated)
-0.554
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MRASNSSSSI SIAKRYFFFF FLFIFFALRS SSGDCSEYHH HHSPMATIGG LHDSQGSQNS VETEALARFA VDEHNKKQNS LLEFARVVRA QEQVVAGTLH
101: HLTLEAIEAG EKKLYEAKVW VKPWLNFKEL QEFKPAGDAP SFTSADLGVK KDGHQPGWQS VPTHDPQVQD AANHAIKTIQ QRSNSLVPYE LHEVADAKAE
201: VIDDFAKFNL LLKVKRGQKE EKFKVEVHKN NQGGFHLNQM EQDHS
101: HLTLEAIEAG EKKLYEAKVW VKPWLNFKEL QEFKPAGDAP SFTSADLGVK KDGHQPGWQS VPTHDPQVQD AANHAIKTIQ QRSNSLVPYE LHEVADAKAE
201: VIDDFAKFNL LLKVKRGQKE EKFKVEVHKN NQGGFHLNQM EQDHS
001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD
Arabidopsis Description
CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.