Factsheet for Zm00001d038173_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18222	Sorghum	extracellular	91.33	90.8
Zm00001d010290_P001	Maize	extracellular	86.13	84.66
TraesCS1A01G256400.1	Wheat	extracellular	55.49	53.04
TraesCS1B01G267100.1	Wheat	extracellular	54.91	52.78
Os05t0409300-01	Rice	extracellular, mitochondrion	52.6	49.46
TraesCS1D01G255800.1	Wheat	extracellular	46.82	47.65
HORVU1Hr1G063320.1	Barley	endoplasmic reticulum, golgi	56.65	39.52
Zm00001d038558_P003	Maize	cytosol	23.7	37.27
Zm00001d012561_P001	Maize	extracellular	24.28	31.34
Zm00001d043175_P001	Maize	extracellular	22.54	28.89
CDY42150	Canola	cytosol	28.32	24.14
Bra038725.1-P	Field mustard	cytosol	27.75	23.41
CDY50343	Canola	cytosol	27.75	23.41
AT3G12490.2	Thale cress	extracellular	30.64	22.65
Bra034755.1-P	Field mustard	extracellular	27.75	21.52
CDY08429	Canola	extracellular	28.32	21.4
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	30.06	21.22
KRH20612	Soybean	endoplasmic reticulum	29.48	20.82
CDY08430	Canola	extracellular	27.75	20.51
KRH13275	Soybean	mitochondrion	28.32	20.0
CDY03938	Canola	extracellular	18.5	15.24
CDY50523	Canola	cytosol	12.14	14.0

Protein Annotations

EntrezGene:100285320	Gene3D:3.10.450.650	MapMan:35.1	ProteinID:AQK85928.1	ProteinID:AQK85929.1	ProteinID:AQK85931.1
EMBL:BN000510	EMBL:BT040866	ncoils:Coil	InterPro:Cystatin	InterPro:Cystatin_dom	EMBL:EU965038
GO:GO:0003674	GO:GO:0004869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466
GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	MEROPS:I25.053	PFAM:PD001231
PFAM:PF16845	PANTHER:PTHR11413	PANTHER:PTHR11413:SF62	UniProt:Q4FZ51	SMART:SM00043	SUPFAM:SSF54403
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000590405	EnsemblPlantsGene:Zm00001d038173	EnsemblPlants:Zm00001d038173_P003	EnsemblPlants:Zm00001d038173_T003
SEG:seg	:	:	:	:	:

Description

cystatin5Putative cystatin

Coordinates

chr6:+:150515334..150517736

Molecular Weight (calculated)

18525.9 Da

IEP (calculated)

5.317

GRAVY (calculated)

-0.071

Length

173 amino acids

Sequence
(BLAST)

001: MMPRRALLFA AVLLAASAAA VSGFHLGGDE SGLVRGVLAA LRERAEAEDA ARFAVAHYNK NQGAALEFTR VLKSKRQVVT GTLHDLILEA ADAGKKSVYR
101: AKVWVKPWED FKSVVEFRLV GDSESEPEPS VASDVSSGQA IAKLSLEADI VQEEARLHTI ENDGLSGDFT SSS

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.