Factsheet for TraesCS1B01G267100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G256400.1	Wheat	extracellular	93.89	93.37
TraesCS1D01G255800.1	Wheat	extracellular	68.33	72.35
HORVU1Hr1G063320.1	Barley	endoplasmic reticulum, golgi	88.33	64.11
EES18222	Sorghum	extracellular	54.44	56.32
Zm00001d038173_P003	Maize	extracellular	52.78	54.91
Zm00001d010290_P001	Maize	extracellular	52.22	53.41
Os05t0409300-01	Rice	extracellular, mitochondrion	53.33	52.17
TraesCS1B01G322100.1	Wheat	mitochondrion	23.33	39.25
CDY42150	Canola	cytosol	28.33	25.12
TraesCS3B01G215400.1	Wheat	extracellular	32.78	24.28
AT3G12490.2	Thale cress	extracellular	31.11	23.93
CDY08429	Canola	extracellular	29.44	23.14
CDY50343	Canola	cytosol	26.11	22.93
Bra038725.1-P	Field mustard	cytosol	26.11	22.93
Bra034755.1-P	Field mustard	extracellular	28.33	22.87
KRH20612	Soybean	endoplasmic reticulum	30.0	22.04
KRH13275	Soybean	mitochondrion	29.44	21.63
CDY08430	Canola	extracellular	26.67	20.51
CDY03938	Canola	extracellular	19.44	16.67
CDY50523	Canola	cytosol	13.33	16.0

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869
GO:GO:0030234	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF62
InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G267100
EnsemblPlants:TraesCS1B01G267100.1	TIGR:cd00042	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1B:+:469999416..470002766

Molecular Weight (calculated)

19017.7 Da

IEP (calculated)

8.111

GRAVY (calculated)

-0.018

Length

180 amino acids

Sequence
(BLAST)

001: MVRRCGCSGA MLLALSLAVL LAASAVPGAA GFHLGGDESG LVRGMLAAVR ERAEAEDAAR FAVAEHNRKQ GSALEFTRVV NAKRQVVAGT LHDLMVEVVD
101: SGKKSMYKAK VWVKPWQNFK AVVEFCHAGD FQSESSVASD GSTGQAILKL SLQTDMAPKM HSNENTGLSV DSSSSQAHTV

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.