Factsheet for Bra038725.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50343	Canola	cytosol	97.07	97.07
Bra034755.1-P	Field mustard	extracellular	91.71	84.3
CDY03938	Canola	extracellular	77.07	75.24
AT3G12490.2	Thale cress	extracellular	85.85	75.21
CDY50523	Canola	cytosol	53.66	73.33
GSMUA_AchrUn_...	Banana	cytosol	34.15	72.92
VIT_13s0084g00050.t01	Wine grape	cytosol	67.32	68.66
PGSC0003DMT400068064	Potato	cytosol	64.39	65.67
Bra016965.1-P	Field mustard	cytosol	29.76	65.59
GSMUA_Achr3P18480_001	Banana	cytosol, unclear	65.85	65.22
Bra000210.1-P	Field mustard	cytosol, mitochondrion, plastid	28.78	62.77
KRH20612	Soybean	endoplasmic reticulum	67.32	56.33
KRH13275	Soybean	mitochondrion	66.34	55.51
Solyc03g097270.2.1	Tomato	extracellular	62.93	54.89
Bra008912.1-P	Field mustard	cytosol	26.83	54.46
EES02749	Sorghum	extracellular	62.93	53.75
Bra023365.1-P	Field mustard	cytosol	26.34	53.47
Os01t0270100-01	Rice	plasma membrane	64.88	53.2
TraesCS3A01G185800.1	Wheat	extracellular	62.44	52.67
TraesCS3D01G189800.1	Wheat	plastid	61.95	52.26
TraesCS3B01G215400.1	Wheat	extracellular	61.46	51.85
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	59.51	49.8
Bra005839.1-P	Field mustard	extracellular	51.71	46.29
HORVU3Hr1G038190.1	Barley	endoplasmic reticulum, golgi, nucleus	61.95	41.64
TraesCS1D01G255800.1	Wheat	extracellular	23.41	28.24
Zm00001d010290_P001	Maize	extracellular	23.9	27.84
Zm00001d038173_P003	Maize	extracellular	23.41	27.75
EES18222	Sorghum	extracellular	23.41	27.59
Os05t0409300-01	Rice	extracellular, mitochondrion	23.9	26.63
TraesCS1B01G267100.1	Wheat	extracellular	22.93	26.11
TraesCS1A01G256400.1	Wheat	extracellular	22.93	25.97
HORVU1Hr1G063320.1	Barley	endoplasmic reticulum, golgi	22.93	18.95

Protein Annotations

Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	EnsemblPlantsGene:Bra038725	EnsemblPlants:Bra038725.1	EnsemblPlants:Bra038725.1-P
InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005829	GO:GO:0006950
GO:GO:0006972	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009414
GO:GO:0009628	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234
GO:GO:0030414	GO:GO:0050897	UniProt:M4FCA9	PFAM:PD001231	PFAM:PF00031	PFAM:PF16845
ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF56	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403
UniParc:UPI0002545239	SEG:seg	:	:	:	:

Description

AT3G12490 (E=2e-087) ATCYSB | cysteine protease inhibitor, putative / cystatin, putative

Coordinates

chrA01:+:26424856..26425753

Molecular Weight (calculated)

23004.2 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.660

Length

205 amino acids

Sequence
(BLAST)

001: MAMLGGVRDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTMHHLTL EIIEAGKKKL YEAKVWVKPW LNFKELQEFK PASDDGSPSA
101: TITPSDLGCK KDEGASGWRE VPGDDPEVQH VADHAVKTIQ QRSNSLFPYE LQEVVHANAE VTGEAAKYNM VLKLKRGEKE EKFKVEVHKN HEGVLHLNHM
201: EQHHD

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.