Factsheet for PGSC0003DMT400068064

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g097270.2.1	Tomato	extracellular	97.01	82.98
GSMUA_AchrUn_...	Banana	cytosol	32.34	67.71
VIT_13s0084g00050.t01	Wine grape	cytosol	66.67	66.67
Bra038725.1-P	Field mustard	cytosol	65.67	64.39
CDY42150	Canola	cytosol	64.68	64.04
CDY50343	Canola	cytosol	65.17	63.9
GSMUA_Achr3P18480_001	Banana	cytosol, unclear	60.7	58.94
Bra034755.1-P	Field mustard	extracellular	65.17	58.74
CDY08429	Canola	extracellular	64.18	56.33
PGSC0003DMT400058429	Potato	extracellular	27.36	56.12
AT3G12490.2	Thale cress	extracellular	65.17	55.98
CDY08430	Canola	extracellular	64.18	55.13
KRH20612	Soybean	endoplasmic reticulum	67.16	55.1
KRH13275	Soybean	mitochondrion	65.67	53.88
CDY50523	Canola	cytosol	38.81	52.0
TraesCS3A01G185800.1	Wheat	extracellular	60.2	49.79
TraesCS3B01G215400.1	Wheat	extracellular	60.2	49.79
TraesCS3D01G189800.1	Wheat	plastid	60.2	49.79
CDY03938	Canola	extracellular	51.74	49.52
Os01t0270100-01	Rice	plasma membrane	59.7	48.0
EES02749	Sorghum	extracellular	57.21	47.92
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	56.22	46.12
HORVU3Hr1G038190.1	Barley	endoplasmic reticulum, golgi, nucleus	59.2	39.02
PGSC0003DMT400069146	Potato	cytosol	22.89	19.83
PGSC0003DMT400015164	Potato	extracellular	21.39	13.78
PGSC0003DMT400015254	Potato	cytosol	26.37	10.47

Protein Annotations

Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	ProteinID:ABA40456	ProteinID:ABA40456.1	InterPro:Cystatin
InterPro:Cystatin_dom	EMBL:DQ191655	GO:GO:0003674	GO:GO:0004869	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414
UniProt:M1CID9	PFAM:PD001231	PFAM:PF16845	EnsemblPlantsGene:PGSC0003DMG400026473	PGSC:PGSC0003DMG400026473	EnsemblPlants:PGSC0003DMT400068064
ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF56	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403
UniParc:UPI00029529D2	:	:	:	:	:

Description

Cystatin [Source:PGSC_GENE;Acc:PGSC0003DMG400026473]

Coordinates

chr3:-:46460413..46465468

Molecular Weight (calculated)

22589.7 Da

IEP (calculated)

6.455

GRAVY (calculated)

-0.620

Length

201 amino acids

Sequence
(BLAST)

001: MATLGGVHDS HGSSQNSDEI HSLAKFAVDE HNKKENAMIE LARVVKAQEQ TVAGKLHHLT LEVMDAGKKK LYEAKVWVKP WLNFKELQEF KHVEDVPTFT
101: SSDLGVKQVE QTSGLKSVPV HDPVVEEAAE HAIKTIQQRS NSLLPYELQE IVHANAEMAD DHTKLHLVIK TSRGGKEEKF KVQVQHNNEG AFHLNHMEPD
201: N

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.