Factsheet for PGSC0003DMT400015254

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058429	Potato	extracellular	11.07	57.14
KRH18619	Soybean	cytosol	10.28	53.61
KRG89741	Soybean	cytosol	10.08	52.58
KRG98869	Soybean	cytosol	10.47	52.48
VIT_06s0009g02230.t01	Wine grape	cytosol	10.08	50.49
PGSC0003DMT400015164	Potato	extracellular	30.63	49.68
KRH14629	Soybean	cytosol	9.29	45.63
PGSC0003DMT400069146	Potato	cytosol	18.38	40.09
KRH14630	Soybean	cytosol	10.87	27.5
PGSC0003DMT400068064	Potato	cytosol	10.47	26.37
KRH14632	Soybean	cytosol	8.3	22.83

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	ProteinID:CAA48037	ProteinID:CAA48037.1	InterPro:Cystatin	InterPro:Cystatin_dom
GO:GO:0003674	GO:GO:0004869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466
GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	MEROPS:I25.015	UniProt:M1A5Q3
PFAM:PD001231	PFAM:PF00031	EnsemblPlantsGene:PGSC0003DMG400005950	PGSC:PGSC0003DMG400005950	EnsemblPlants:PGSC0003DMT400015254	ScanProsite:PS00287
PANTHER:PTHR11413	PANTHER:PTHR11413:SF57	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	UniParc:UPI0002953C66
EMBL:X67844	SEG:seg	:	:	:	:

Description

Multicystatin [Source:PGSC_GENE;Acc:PGSC0003DMG400005950]

Coordinates

chr6:+:54194363..54198068

Molecular Weight (calculated)

58131.5 Da

IEP (calculated)

6.721

GRAVY (calculated)

-0.191

Length

506 amino acids

Sequence
(BLAST)

001: MAIVGGLVDV PFENKVEFDD LARFAVQDYN QKNDSSLEFK KVLNVKQQIV AGIMYYITFE ATEGGNKKEY EAKILLRKWE DLKKVVGFKL VGDDSTMPGG
101: IVNVPNPNNT KFQELARFAI QDYNKKQNAH LEFVENLNVK EQVVAGIMYY ITLAATDDAG KKKIYKKVLN VKQQIVAGIM YYITLAAIDA GKKKIYEAKI
201: WVKEWEDFKK VVEFKLVGDD IAKLGGITDV PFPNNPEFQD LARFAIQVYN KKEKAHLEFV ENLNVKEQVV AGMMYYITLV ATDDAGKEKI YEAKIWVKEW
301: ENFKKVIEFK LFIGDDVPIL GGIINVQGIN SLVFQDLARF AVQDHNKKEK AHLEFVEVLN VKEQVVAGMM YYITLAATDA GKKKIYEAKI WVKEWEDFKK
401: VVEFKLVGDD SAKLGGIIIV PFPISFEIQD LARFAVQDYN KKENAHLEFV EVLNVKEQVV AGMMYYITLV ATDDGYKKIY KTKIWVKEWE NFKEVQEFKQ
501: IVYATK

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.