Factsheet for PGSC0003DMT400069146

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 2
cytosol 4
peroxisome 1
extracellular 1
endoplasmic reticulum 1
mitochondrion 2
unclear 1
plastid 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory, unclear
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory, unclear
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058429	Potato	extracellular	22.84	54.08
VIT_06s0009g02230.t01	Wine grape	cytosol	21.98	50.49
KRG89741	Soybean	cytosol	20.69	49.48
KRH18619	Soybean	cytosol	20.69	49.48
KRG98869	Soybean	cytosol	21.12	48.51
KRH14629	Soybean	cytosol	18.53	41.75
PGSC0003DMT400015164	Potato	extracellular	39.22	29.17
KRH14630	Soybean	cytosol	20.26	23.5
PGSC0003DMT400068064	Potato	cytosol	19.83	22.89
KRH14632	Soybean	cytosol	16.81	21.2
PGSC0003DMT400015254	Potato	cytosol	40.09	18.38

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538
GO:GO:0030234	GO:GO:0030414	UniProt:M1CJZ8	PFAM:PD001231	PFAM:PF00031	EnsemblPlantsGene:PGSC0003DMG400026899
PGSC:PGSC0003DMG400026899	EnsemblPlants:PGSC0003DMT400069146	ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF57	InterPro:Prot_inh_cystat_CS
SMART:SM00043	SUPFAM:SSF54403	UniParc:UPI0002961FBB	:	:	:

Description

Multicystatin [Source:PGSC_GENE;Acc:PGSC0003DMG400026899]

Coordinates

chr6:-:54093287..54095728

Molecular Weight (calculated)

26654.8 Da

IEP (calculated)

5.203

GRAVY (calculated)

-0.296

Length

232 amino acids

Sequence
(BLAST)

001: MLYYITLAAI DAGKKKIYET KIWVKEWEDF KKVVEFKLVG DDSAKTGGII NVPNPNSPEF QDLARFAVQD YNNTQTIYFS ECSFGVCRKF EVWENFKKVV
101: EFKLVGDDSA KLGGIINVPF PNNPEFQDLA RFAVQDYNKK ENAHLEYVEN LNVKEQLVAG MIYYITLVAT DAGKKKIYEA KIWVKVWENF KKVVEFKLVG
201: DDSAKLGGII NVPFPNNPEF QDLARFAVQD YN

Best Arabidopsis Sequence Match ( AT3G12490.1 )
(BLAST)

001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.