CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89741	Soybean	cytosol	67.33	70.1
KRH18619	Soybean	cytosol	67.33	70.1
PGSC0003DMT400058429	Potato	extracellular	60.4	62.24
KRH14629	Soybean	cytosol	62.38	61.16
VIT_06s0009g02230.t01	Wine grape	cytosol	59.41	59.41
Solyc01g009020.2.1	Tomato	extracellular	60.4	53.98
KRH14632	Soybean	cytosol	48.51	26.63
KRH14630	Soybean	cytosol	52.48	26.5
KRH13275	Soybean	mitochondrion	52.48	21.63
KRH20612	Soybean	endoplasmic reticulum	52.48	21.63
PGSC0003DMT400069146	Potato	cytosol	48.51	21.12
PGSC0003DMT400015164	Potato	extracellular	49.51	16.03
PGSC0003DMT400015254	Potato	cytosol	52.48	10.47

Protein Annotations

EntrezGene:100803955	Gene3D:3.10.450.650	MapMan:35.1	EMBL:ACUP02010930	InterPro:Cystatin	InterPro:Cystatin_dom
EnsemblPlantsGene:GLYMA_18G103700	GO:GO:0002020	GO:GO:0003674	GO:GO:0004869	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538
GO:GO:0030234	GO:GO:0030414	GO:GO:2000117	UniProt:I1N0U3	MEROPS:I25.014	EnsemblPlants:KRG98869
ProteinID:KRG98869	ProteinID:KRG98869.1	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413
PANTHER:PTHR11413:SF57	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	UniParc:UPI000233E2AB	SEG:seg

Description

hypothetical protein

Coordinates

chr18:+:11309282..11311702

Molecular Weight (calculated)

11374.7 Da

IEP (calculated)

5.725

GRAVY (calculated)

-0.246

Length

101 amino acids

Sequence
(BLAST)

001: MAMIGGISQV EGSQNSATID RLAHFAVDEH NKKENAVLEF VKVVNVKQQV VSGMLYYITL EAKDGEKNKV YETKVWVKPW LDFKEIQEFK LIGDAPYAAP
101: S

Best Arabidopsis Sequence Match ( AT3G12490.1 )
(BLAST)

001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.