CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14630	Soybean	cytosol	60.33	55.5
KRG89741	Soybean	cytosol	28.8	54.64
KRH18619	Soybean	cytosol	28.8	54.64
KRH14629	Soybean	cytosol	29.89	53.4
KRG98869	Soybean	cytosol	26.63	48.51
VIT_06s0009g02230.t01	Wine grape	cytosol	26.09	47.52
PGSC0003DMT400058429	Potato	extracellular	24.46	45.92
Solyc01g009020.2.1	Tomato	extracellular	24.46	39.82
KRH20612	Soybean	endoplasmic reticulum	29.89	22.45
KRH13275	Soybean	mitochondrion	28.8	21.63
PGSC0003DMT400069146	Potato	cytosol	21.2	16.81
PGSC0003DMT400015164	Potato	extracellular	23.91	14.1
PGSC0003DMT400015254	Potato	cytosol	22.83	8.3

Protein Annotations

Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	EMBL:ACUP02008511	InterPro:Cystatin	InterPro:Cystatin-related_pln
InterPro:Cystatin_dom	EnsemblPlantsGene:GLYMA_14G038500	GO:GO:0002020	GO:GO:0003674	GO:GO:0004869	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0019538
GO:GO:0030234	GO:GO:0030414	GO:GO:2000117	UniProt:K7M4T1	EnsemblPlants:KRH14632	ProteinID:KRH14632
ProteinID:KRH14632.1	ProteinID:KRH14633.1	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413
PANTHER:PTHR11413:SF57	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	TIGRFAMs:TIGR01638	UniParc:UPI000233BB57

Description

hypothetical protein

Coordinates

chr14:+:2876239..2877988

Molecular Weight (calculated)

20772.7 Da

IEP (calculated)

4.652

GRAVY (calculated)

-0.284

Length

184 amino acids

Sequence
(BLAST)

001: MATETKVAVL GGITEVQGAA NSVEINNLAR FAVEEQNKRE NSVLEFVRVI SAQQQVVSGV NYYITLEAKD GEIKNEYKAK VWERESQELL EFMPTLGAGG
101: EIDHLARFAV EEQNKRENAN LEFVGVIRAK QQVVEGFIYY ITLEAKDGET KNVYETKVWV RSWLNSKEVL EFKPISINPL SVSV

Best Arabidopsis Sequence Match ( AT3G12490.1 )
(BLAST)

001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.