Factsheet for Zm00001d043175_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012561_P001	Maize	extracellular	75.56	76.12
KXG33568	Sorghum	extracellular	68.89	69.92
AT5G12140.1	Thale cress	cytosol	41.48	55.45
Bra023365.1-P	Field mustard	cytosol	40.74	54.46
CDX97171	Canola	cytosol	40.74	54.46
Bra008912.1-P	Field mustard	cytosol	40.0	53.47
CDX69704	Canola	cytosol	40.0	53.47
CDX85699	Canola	cytosol	40.0	53.47
CDX91170	Canola	cytosol	40.0	53.47
Zm00001d038558_P003	Maize	cytosol	42.96	52.73
Zm00001d010290_P001	Maize	extracellular	30.37	23.3
Zm00001d038173_P003	Maize	extracellular	28.89	22.54
Zm00001d008268_P002	Maize	endoplasmic reticulum, extracellular	40.0	22.04

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	EntrezGene:542213	UniProt:B6TMF0	InterPro:Cystatin	InterPro:Cystatin_dom
EMBL:EU966165	GO:GO:0003674	GO:GO:0004869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010466	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	ProteinID:ONM37167.1
ProteinID:ONM37168.1	ProteinID:ONM37169.1	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413
PANTHER:PTHR11413:SF45	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000182E599	EnsemblPlantsGene:Zm00001d043175	EnsemblPlants:Zm00001d043175_P001	EnsemblPlants:Zm00001d043175_T001	SEG:seg	:

Description

cystatin1Cystatin-1

Coordinates

chr3:-:190628817..190634540

Molecular Weight (calculated)

14854.9 Da

IEP (calculated)

7.679

GRAVY (calculated)

-0.194

Length

135 amino acids

Sequence
(BLAST)

001: MRKHRIVSLV AALLVLLALA AVSSTRSAQK ESAADNAGML AGGIKDVPAN ENDLQLQELA RFAVNEHNQK ANALLGFEKL VKAKTQVVAG TMYYLTIEVK
101: DGEVNKLYEA KVWEKPWENF KQLQEFKPVE EGASA

Best Arabidopsis Sequence Match ( AT5G12140.1 )
(BLAST)

001: MADQQAGTIV GGVRDIDANA NDLQVESLAR FAVDEHNKNE NLTLEYKRLL GAKTQVVAGT MHHLTVEVAD GETNKVYEAK VLEKAWENLK QLESFNHLHD
101: V

Arabidopsis Description

CYS1Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A178UCE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.