CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043175_P001	Maize	extracellular	69.92	68.89
Zm00001d012561_P001	Maize	extracellular	69.17	68.66
Bra023365.1-P	Field mustard	cytosol	42.11	55.45
CDX97171	Canola	cytosol	42.11	55.45
Bra008912.1-P	Field mustard	cytosol	41.35	54.46
CDX69704	Canola	cytosol	41.35	54.46
CDX85699	Canola	cytosol	41.35	54.46
CDX91170	Canola	cytosol	41.35	54.46
AT5G12140.1	Thale cress	cytosol	39.85	52.48
EES19739	Sorghum	mitochondrion	44.36	37.82
KXG22254	Sorghum	cytosol, extracellular, mitochondrion, plastid	42.86	32.57
EES18222	Sorghum	extracellular	33.83	25.86
EES02749	Sorghum	extracellular	39.85	22.08

Protein Annotations

Gene3D:3.10.450.650	MapMan:35.1	UniProt:A0A1B6Q6M7	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674
GO:GO:0004869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951
GO:GO:0019538	GO:GO:0030234	GO:GO:0030414	EnsemblPlants:KXG33568	ProteinID:KXG33568	ProteinID:KXG33568.1
ProteinID:KXG33569.1	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF45
InterPro:Prot_inh_cystat_CS	SMART:SM00043	EnsemblPlantsGene:SORBI_3003G327700	SUPFAM:SSF54403	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001C80A2E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:65332341..65335075

Molecular Weight (calculated)

14891.0 Da

IEP (calculated)

6.813

GRAVY (calculated)

-0.332

Length

133 amino acids

Sequence
(BLAST)

001: MRKHRIVPLV AALLVLLALA VSSTRNRNAQ EGEESMALAG GIKDVPANEN DLHLQELARF AVEEHNKKAN ALLGYEKLVK AKTQVVAGTM YYLTVEVKDG
101: EVKKLYEAKV WEKPWENFKE LQEFKPVEEG ASA

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.